Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   ACFCTL_RS06830 Genome accession   NZ_OZ182546
Coordinates   1488573..1488914 (+) Length   113 a.a.
NCBI ID   WP_014841550.1    Uniprot ID   A0AAV2UWU9
Organism   Legionella pneumophila isolate ZIB8567     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1483573..1493914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFCTL_RS06805 acpP 1484401..1484649 (+) 249 WP_003631752.1 acyl carrier protein -
  ACFCTL_RS06810 fabF 1484669..1485907 (+) 1239 WP_014841546.1 beta-ketoacyl-ACP synthase II -
  ACFCTL_RS06815 mltG 1485908..1486906 (+) 999 WP_014841547.1 endolytic transglycosylase MltG -
  ACFCTL_RS06820 tmk 1486906..1487544 (+) 639 WP_014841548.1 dTMP kinase -
  ACFCTL_RS06825 - 1487541..1488446 (+) 906 WP_014841549.1 DNA polymerase III subunit delta' -
  ACFCTL_RS06830 pilZ 1488573..1488914 (+) 342 WP_014841550.1 PilZ domain-containing protein Machinery gene
  ACFCTL_RS06835 - 1488970..1489758 (+) 789 WP_014841551.1 TatD family hydrolase -
  ACFCTL_RS06840 - 1489870..1490970 (+) 1101 WP_014841552.1 anhydro-N-acetylmuramic acid kinase -
  ACFCTL_RS06845 - 1491026..1492318 (+) 1293 WP_014841553.1 MFS transporter -
  ACFCTL_RS06850 - 1492394..1493674 (-) 1281 WP_014841554.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12533.60 Da        Isoelectric Point: 8.2421

>NTDB_id=1167981 ACFCTL_RS06830 WP_014841550.1 1488573..1488914(+) (pilZ) [Legionella pneumophila isolate ZIB8567]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFIGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=1167981 ACFCTL_RS06830 WP_014841550.1 1488573..1488914(+) (pilZ) [Legionella pneumophila isolate ZIB8567]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTATCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991

Multiple sequence alignment