Detailed information NTG1167939

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACLIIK_RS24420
• Genome accession: NZ_OZ176236
• Coordinates: 5243528..5244580 (-)
• Length: 350 a.a.
• NCBI ID: WP_410367420.1
• Uniprot ID: -
• Organism: Achromobacter mucicolens isolate LjRoot1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5238528..5249580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLIIK_RS24400	phnC	5239032..5239802 (+)	771	WP_128828945.1	phosphonate ABC transporter ATP-binding protein	-
ACLIIK_RS24405	phnE	5239799..5240686 (+)	888	WP_062839588.1	phosphonate ABC transporter, permease protein PhnE	-
ACLIIK_RS24410	phnE	5240683..5241507 (+)	825	WP_056325416.1	phosphonate ABC transporter, permease protein PhnE	-
ACLIIK_RS24415	-	5241755..5243413 (+)	1659	WP_334165443.1	CYTH and CHAD domain-containing protein	-
ACLIIK_RS24420	pilA	5243528..5244580 (-)	1053	WP_410367420.1	signal recognition particle-docking protein FtsY	Machinery gene
ACLIIK_RS24425	rsmD	5245053..5245658 (+)	606	WP_410367421.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACLIIK_RS24430	coaD	5245677..5246180 (+)	504	WP_056558877.1	pantetheine-phosphate adenylyltransferase	-
ACLIIK_RS24435	-	5246295..5246546 (+)	252	WP_042795127.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACLIIK_RS24440	-	5246543..5247766 (+)	1224	WP_175156067.1	benzoate/H(+) symporter BenE family transporter	-
ACLIIK_RS24445	-	5247786..5248172 (-)	387	WP_410366243.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 36350.93 Da
• Isoelectric Point: 8.5379

>NTDB_id=1167939 ACLIIK_RS24420 WP_410367420.1 5243528..5244580(-) (pilA) [Achromobacter mucicolens isolate LjRoot1]
MAPTPAPVVPAPAPVSAPAPVSTPAPVAAPAPVIAAVPEPAPAEAPKKASWLSRLKQGLSRTGQSIGGIFVGVKVDENLF
EELESALIMADAGLEATEKLLTALRARVKKERIEDPAKVKTALRQLLADHLRPLERAFDLKRTQPLVVMIAGVNGAGKTT
SIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVSVISQDGGDPAAVAFDSVNAGRARGMGVVMVDTAGRLPT
QLHLMEELKKIRRVIGKADASAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAGSQGVRP
VPVYWIGVGESLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1053 bp

>NTDB_id=1167939 ACLIIK_RS24420 WP_410367420.1 5243528..5244580(-) (pilA) [Achromobacter mucicolens isolate LjRoot1]
ATCGCGCCCACGCCTGCACCCGTGGTCCCGGCGCCTGCGCCGGTATCAGCGCCTGCGCCAGTATCCACGCCTGCCCCTGT
CGCAGCCCCCGCACCCGTCATTGCAGCCGTCCCGGAACCCGCACCCGCCGAGGCGCCCAAGAAGGCCTCGTGGCTGTCGC
GCCTGAAGCAGGGCCTGTCCCGTACGGGTCAGAGCATTGGCGGCATCTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTC
GAGGAACTCGAATCGGCCCTCATTATGGCCGATGCGGGCCTTGAGGCCACCGAGAAGCTCCTGACCGCGCTGCGCGCGCG
CGTCAAGAAGGAACGCATCGAGGACCCGGCCAAGGTGAAGACGGCCCTGCGCCAGTTGCTGGCCGATCATCTGCGCCCGC
TGGAGCGGGCGTTTGACCTGAAGCGCACGCAACCGCTGGTGGTGATGATTGCCGGCGTGAACGGCGCGGGCAAGACGACT
TCCATCGGCAAGCTGGCGCATACGTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCCGCCGGCGACACCTTCCGTGCCGC
CGCGCGCGAGCAACTGGTGGAATGGGGCAGCCGCAACAACGTCAGCGTGATTTCGCAGGACGGCGGCGATCCGGCCGCGG
TGGCGTTCGACTCGGTCAATGCCGGCCGCGCGCGCGGCATGGGCGTGGTGATGGTGGATACCGCCGGCCGCCTGCCCACG
CAGCTGCACCTGATGGAAGAATTGAAGAAAATCCGCCGCGTCATCGGCAAGGCGGATGCGTCCGCGCCGCATGAGGTGCT
GCTGGTGGTGGATGGCAACACGGGTCAGAATGCGCTGGCGCAGATCCGCGCGTTTGACGCTGCCATCAACCTGACCGGTC
TGGTCGTGACCAAGCTGGACGGCACGGCCAAGGGTGGCACGCTGGCCGCCGTTGCCGCGGGCAGCCAGGGCGTGCGTCCG
GTGCCGGTGTATTGGATTGGCGTGGGCGAAAGCCTGGAAGACCTGCAGCCCTTCGTGGCGGACGAGTTCGCGGCCGCATT
GCTGGCGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (146-348)

• SRP54-type protein, helical bundle domain (SRP54_N) (64-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.25	91.429	0.514