Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   AW02_RS15170 Genome accession   NZ_CP007165
Coordinates   3154550..3154690 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis NJN-6     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3149550..3159690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW02_RS15130 (AW02_029900) - 3149728..3150204 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  AW02_RS15135 (AW02_029910) - 3150204..3150488 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  AW02_RS15140 (AW02_029920) mnhG 3150472..3150846 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  AW02_RS15145 (AW02_029930) - 3150886..3151269 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  AW02_RS15150 (AW02_029940) comA 3151291..3151935 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  AW02_RS15155 (AW02_029950) - 3152016..3153191 (-) 1176 Protein_3015 sensor histidine kinase -
  AW02_RS15160 (AW02_029960) comX 3153323..3153487 (-) 165 WP_007613432.1 competence pheromone ComX -
  AW02_RS15165 (AW02_029970) - 3153487..3154398 (-) 912 WP_014305720.1 polyprenyl synthetase family protein -
  AW02_RS15170 (AW02_029980) degQ 3154550..3154690 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AW02_RS15175 (AW02_030000) - 3155156..3155497 (+) 342 WP_014305721.1 hypothetical protein -
  AW02_RS15180 (AW02_030010) - 3155504..3156724 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  AW02_RS15185 (AW02_030020) - 3156854..3158320 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  AW02_RS15190 (AW02_030030) - 3158338..3158889 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  AW02_RS15195 (AW02_030040) - 3158986..3159384 (-) 399 WP_003152031.1 YueI family protein -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=116733 AW02_RS15170 WP_003152043.1 3154550..3154690(-) (degQ) [Bacillus velezensis NJN-6]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=116733 AW02_RS15170 WP_003152043.1 3154550..3154690(-) (degQ) [Bacillus velezensis NJN-6]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891


Multiple sequence alignment