Detailed information NTG1166153

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: AB3213_RS09020
• Genome accession: NZ_OZ061411
• Coordinates: 1761067..1761756 (+)
• Length: 229 a.a.
• NCBI ID: WP_056948148.1
• Uniprot ID: A0AAX0VAL7
• Organism: Latilactobacillus sakei isolate Latilactobacillus sakei CIRM-BIA1912
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1756067..1766756

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3213_RS09000	-	1756508..1757059 (+)	552	WP_056948150.1	cysteine hydrolase family protein	-
AB3213_RS09005	fusA	1757630..1759717 (-)	2088	WP_016265721.1	elongation factor G	-
AB3213_RS09010	rpsG	1759813..1760283 (-)	471	WP_004270185.1	30S ribosomal protein S7	-
AB3213_RS09015	rpsL	1760373..1760786 (-)	414	WP_004270179.1	30S ribosomal protein S12	-
AB3213_RS09020	comC	1761067..1761756 (+)	690	WP_056948148.1	A24 family peptidase	Machinery gene
AB3213_RS09025	-	1761760..1762332 (-)	573	WP_056948146.1	isochorismatase family protein	-
AB3213_RS09030	rpoC	1762506..1766150 (-)	3645	WP_056948144.1	DNA-directed RNA polymerase subunit beta'	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26176.47 Da
• Isoelectric Point: 7.1616

>NTDB_id=1166153 AB3213_RS09020 WP_056948148.1 1761067..1761756(+) (comC) [Latilactobacillus sakei isolate Latilactobacillus sakei CIRM-BIA1912]
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWYDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLAPLFYLYWPQNHWLGAIVFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLESVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVIILLQTPQ

Nucleotide

• Length: 690 bp

>NTDB_id=1166153 AB3213_RS09020 WP_056948148.1 1761067..1761756(+) (comC) [Latilactobacillus sakei isolate Latilactobacillus sakei CIRM-BIA1912]
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACAGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGTATGATTTATTACCACTAT
TCAGCTACTTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTTTTTTACAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGCGCCCCTCTTCTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCATCGTCTTTTGTTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGT
TTTGGCGATGTCGAGTTACTCACTATCCTAACGTTGTGGGTCGGCCTTGAATCCGTTTTGCGAATTCTCTTAGCAGCCTG
TTTAATCTGTATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCTTTTATTC
CCTATATATCGATGGGAGTGGTGATAATACTCCTACAAACACCACAATAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (99-193)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (11-89)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	98.253	100	0.983