Detailed information NTG1166035

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: AB3Y89_RS09900
• Genome accession: NZ_OZ061338
• Coordinates: 1897388..1898077 (+)
• Length: 229 a.a.
• NCBI ID: WP_076645336.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei isolate Latilactobacillus sakei J33
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1892388..1903077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3Y89_RS09880	-	1892830..1893381 (+)	552	WP_061827366.1	cysteine hydrolase family protein	-
AB3Y89_RS09885	fusA	1893951..1896038 (-)	2088	WP_016265721.1	elongation factor G	-
AB3Y89_RS09890	rpsG	1896134..1896604 (-)	471	WP_004270185.1	30S ribosomal protein S7	-
AB3Y89_RS09895	rpsL	1896694..1897107 (-)	414	WP_004270179.1	30S ribosomal protein S12	-
AB3Y89_RS09900	comC	1897388..1898077 (+)	690	WP_076645336.1	A24 family peptidase	Machinery gene
AB3Y89_RS09905	-	1898081..1898653 (-)	573	WP_061827365.1	isochorismatase family protein	-
AB3Y89_RS09910	rpoC	1898827..1902471 (-)	3645	WP_035147345.1	DNA-directed RNA polymerase subunit beta'	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26190.50 Da
• Isoelectric Point: 7.2085

>NTDB_id=1166035 AB3Y89_RS09900 WP_076645336.1 1897388..1898077(+) (comC) [Latilactobacillus sakei isolate Latilactobacillus sakei J33]
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWHDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLVPLFYLYWPQNHWLGATIFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLEPVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVILLLQTPQ

Nucleotide

• Length: 690 bp

>NTDB_id=1166035 AB3Y89_RS09900 WP_076645336.1 1897388..1898077(+) (comC) [Latilactobacillus sakei isolate Latilactobacillus sakei J33]
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACCGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGCATGATTTATTACCACTAT
TCAGCTACCTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTTTTTTACAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGTGCCCCTCTTTTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCACCATCTTTTGCTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGC
TTTGGCGATGTCGAGTTACTCACTATCCTAACGTTGTGGGTGGGCCTTGAACCCGTTTTGCGAATTCTCTTGGCGGCCTG
TCTAATTTGCATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCGTTTATCC
CCTATATATCGATGGGTGTGGTAATTCTACTTCTACAAACACCGCAGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (11-89)

• Type IV leader peptidase family (Peptidase_A24) (99-193)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	97.38	100	0.974