Detailed information NTG1165965

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: AB3225_RS05605
• Genome accession: NZ_OZ061332
• Coordinates: 1077163..1077870 (-)
• Length: 235 a.a.
• NCBI ID: WP_081394487.1
• Uniprot ID: A0A385ABK3
• Organism: Latilactobacillus curvatus isolate Latilactobacillus curvatus J116
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1072163..1082870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3225_RS05600	rpoC	1073449..1077090 (+)	3642	WP_367370422.1	DNA-directed RNA polymerase subunit beta'	-
AB3225_RS05605	comC	1077163..1077870 (-)	708	WP_081394487.1	A24 family peptidase	Machinery gene
AB3225_RS05610	rpsL	1078141..1078554 (+)	414	WP_004270179.1	30S ribosomal protein S12	-
AB3225_RS05615	rpsG	1078644..1079114 (+)	471	WP_076786307.1	30S ribosomal protein S7	-
AB3225_RS05620	fusA	1079206..1081293 (+)	2088	WP_004270213.1	elongation factor G	-
AB3225_RS05625	rsgA	1081938..1082411 (-)	474	WP_263281484.1	ribosome small subunit-dependent GTPase A	-
AB3225_RS05630	rsgA	1082366..1082692 (-)	327	WP_089541900.1	GTPase RsgA	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26588.96 Da
• Isoelectric Point: 6.9090

>NTDB_id=1165965 AB3225_RS05605 WP_081394487.1 1077163..1077870(-) (comC) [Latilactobacillus curvatus isolate Latilactobacillus curvatus J116]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGCTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLRHPVVLALVGHRPIPFVPYISYGVLIVLFIVNT

Nucleotide

• Length: 708 bp

>NTDB_id=1165965 AB3225_RS05605 WP_081394487.1 1077163..1077870(-) (comC) [Latilactobacillus curvatus isolate Latilactobacillus curvatus J116]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGTCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGCTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTACTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCTATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCTGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATCGATAGTCTCCGCCATCCAGTTGTCCTCGCCTTAGTCGGACACC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (102-195)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (12-94)

3D structure

• AlphaFold DB: A0A385ABK3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	50.661	96.596	0.489