Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AB3Y92_RS05955 Genome accession   NZ_OZ061327
Coordinates   1194841..1195506 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1189841..1200506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Y92_RS05925 - 1190164..1191252 (+) 1089 WP_106072466.1 ABC transporter ATP-binding protein -
  AB3Y92_RS05930 - 1191254..1192174 (+) 921 WP_058014297.1 ABC transporter ATP-binding protein -
  AB3Y92_RS05935 - 1192280..1192567 (+) 288 WP_058014296.1 hypothetical protein -
  AB3Y92_RS05940 - 1192705..1193283 (+) 579 WP_058014295.1 GNAT family N-acetyltransferase -
  AB3Y92_RS05945 spxA 1193477..1193872 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  AB3Y92_RS05950 - 1193913..1194578 (-) 666 WP_058014294.1 TerC family protein -
  AB3Y92_RS05955 mecA 1194841..1195506 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  AB3Y92_RS05960 cls 1195592..1197112 (+) 1521 WP_339165508.1 cardiolipin synthase -
  AB3Y92_RS05965 - 1197275..1198435 (+) 1161 WP_342498136.1 competence protein CoiA family protein -
  AB3Y92_RS05970 pepF 1198650..1200476 (+) 1827 WP_284906233.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=1165899 AB3Y92_RS05955 WP_012009573.1 1194841..1195506(+) (mecA) [Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1165899 AB3Y92_RS05955 WP_012009573.1 1194841..1195506(+) (mecA) [Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGATGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGATCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment