Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AB3Y92_RS05465 | Genome accession | NZ_OZ061327 |
| Coordinates | 1091938..1092516 (+) | Length | 192 a.a. |
| NCBI ID | WP_044140707.1 | Uniprot ID | A0AB34QUR0 |
| Organism | Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1086938..1097516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3Y92_RS05445 | - | 1087430..1088725 (-) | 1296 | WP_058014375.1 | globin-coupled sensor protein | - |
| AB3Y92_RS05450 | - | 1088817..1090349 (-) | 1533 | WP_058014374.1 | FAD-dependent oxidoreductase | - |
| AB3Y92_RS05455 | - | 1090495..1091355 (+) | 861 | WP_058014373.1 | SDR family oxidoreductase | - |
| AB3Y92_RS05460 | - | 1091418..1091648 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| AB3Y92_RS05465 | comK | 1091938..1092516 (+) | 579 | WP_044140707.1 | competence protein ComK | Regulator |
| AB3Y92_RS05470 | - | 1092671..1093777 (+) | 1107 | WP_339165434.1 | D-TA family PLP-dependent enzyme | - |
| AB3Y92_RS05475 | - | 1094095..1094577 (+) | 483 | WP_268466937.1 | hypothetical protein | - |
| AB3Y92_RS05480 | - | 1094609..1096048 (-) | 1440 | WP_268498134.1 | PLP-dependent aminotransferase family protein | - |
| AB3Y92_RS05485 | - | 1096193..1097359 (+) | 1167 | WP_268466939.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22362.42 Da Isoelectric Point: 8.7996
>NTDB_id=1165892 AB3Y92_RS05465 WP_044140707.1 1091938..1092516(+) (comK) [Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=1165892 AB3Y92_RS05465 WP_044140707.1 1091938..1092516(+) (comK) [Bacillus pumilus isolate Bacillus pumilus CIRM-BIA2784]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCTCATAAGCCTCCC
ATTGTAATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCTTTTGAGAGTCAGGTACACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCTCATAAGCCTCCC
ATTGTAATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCTTTTGAGAGTCAGGTACACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |