Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACE4RC_RS04950 Genome accession   NZ_OZ059816
Coordinates   952619..953335 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus isolate H2_22S00625-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 947619..958335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RC_RS04920 - 947888..948514 (+) 627 WP_000522384.1 nitroreductase family protein -
  ACE4RC_RS04925 - 948822..949607 (+) 786 WP_000867947.1 carbon-nitrogen family hydrolase -
  ACE4RC_RS04930 hld 950207..950287 (-) 81 WP_000046022.1 delta-hemolysin -
  ACE4RC_RS04935 agrB 950577..951146 (+) 570 WP_001105708.1 accessory gene regulator AgrB -
  ACE4RC_RS04940 agrD 951143..951283 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  ACE4RC_RS04945 agrC 951308..952600 (+) 1293 WP_001825886.1 quorum-sensing sensor histidine kinase AgrC -
  ACE4RC_RS04950 agrA 952619..953335 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACE4RC_RS04955 - 953707..954666 (-) 960 WP_001253294.1 carbohydrate kinase -
  ACE4RC_RS04960 - 954663..956147 (-) 1485 WP_000141407.1 sucrose-6-phosphate hydrolase -
  ACE4RC_RS04965 - 956296..957246 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1165030 ACE4RC_RS04950 WP_000688492.1 952619..953335(+) (agrA) [Staphylococcus aureus isolate H2_22S00625-1]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1165030 ACE4RC_RS04950 WP_000688492.1 952619..953335(+) (agrA) [Staphylococcus aureus isolate H2_22S00625-1]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment