Detailed information NTG1162878

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: ABNR90_RS08280
• Genome accession: NZ_OZ021673
• Coordinates: 1562624..1565713 (-)
• Length: 1029 a.a.
• NCBI ID: WP_252295618.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae isolate SGC-23-002
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1557624..1570713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNR90_RS08270	yccS	1558288..1560438 (+)	2151	WP_003697785.1	YccS family putative transporter	-
ABNR90_RS08275	-	1561370..1561654 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
ABNR90_RS08280	pilC	1562624..1565713 (-)	3090	WP_252295618.1	PilC family type IV pilus tip adhesin	Machinery gene
ABNR90_RS08285	-	1566401..1566664 (+)	264	WP_228547130.1	hypothetical protein	-
ABNR90_RS08290	gnd	1566744..1568192 (+)	1449	WP_047918633.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
ABNR90_RS08295	waaA	1568255..1569526 (+)	1272	WP_149032448.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
ABNR90_RS08300	-	1569567..1570016 (+)	450	WP_003692085.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1029 a.a.
• Molecular weight: 112555.52 Da
• Isoelectric Point: 9.7342

>NTDB_id=1162878 ABNR90_RS08280 WP_252295618.1 1562624..1565713(-) (pilC) [Neisseria gonorrhoeae isolate SGC-23-002]
MNKTLKRQVFRHTALYAAILMFSHTGGGGAMAQTYKYAIVMNAQNQPEVRRNGQYSTIKGKDREREYTYHNTRGGGGSVS
FNNTDTLVSQQSGTAVFGTATYLPPYGKVSGFDADALKERNNAVDWIRTTRIALAGYSYADVICKSSNQCPQLVYETKFA
FGQQGLQRKGNKLDIYEDKSRDNSPIYKLKDYPWLGVSFNLGSENTVKNSKSFNKLISSFNEDNNNQTIVSTTRDHPISL
GNWQREHTAVAYYLNAKLHLLDKKRIEDIAQGKTVDLGTLRPRVETTGRGWLSFWARWDIKDTGQIPVKLGLPQVKAGRC
INKLNPNPKSALSPALTAPALWFGPAQNGKVQMYSASVSTYPDSSSSKIFLQNLSRNDDKNKPGRYSLKSLNDGEIQSRQ
PSFNGRQTIIRLDSGVQLIKLNGSKDEVVTFGNTGNNGTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKFKSINREP
GKYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRQYFDNDTSALKD
STLAQELRAFAEKGYVGDRYGVDGGFVLRQVELSGQKHVFMFGAMGLGGRGAYALDLSKINENYPAAAPLFDVKNGDNNG
KNRVKVELGYTVGTPQIGKTRNGTYSAFLASGYAAKDIGSGDNKTALYVYDLKNTLGTPIAKIEVKDGKGGLSSPTLVDK
DLDGTVDIAYAGDRGGNMYRFDLSDSNPDKWSVSTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLSESDVFNTDEQYIY
GIFDDDKANVSVKVKDHMGDGLLKQNLTQENKTLFLTNNKASGGSADKGWVVKLREGERVTVKPTVVLRTAFVTIRKYKD
DGCGADTAILGINTADGGALTPRSARPIVPEANTAVAQYSGHKKTAGGKSVPIGCMEKGGKTVCPNGYVYDKPVNVRYLD
ETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3090 bp

>NTDB_id=1162878 ABNR90_RS08280 WP_252295618.1 1562624..1565713(-) (pilC) [Neisseria gonorrhoeae isolate SGC-23-002]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACGTATAAATACGCTATTGTGATGAACGCGCAAAACCAGCCCGAGGTACGGCGGAATGGGC
AATATTCAACAATAAAGGGCAAAGACAGGGAGCGCGAATATACTTATCATAACACACGAGGAGGAGGAGGCTCTGTCTCA
TTCAACAATACCGATACCCTTGTTTCCCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGG
CAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCAACAATGCCGTCGATTGGATTCGTACCACCCGCATCGCGC
TGGCAGGCTACAGCTACGCCGACGTCATATGCAAAAGCAGCAACCAATGCCCCCAACTTGTCTATGAGACCAAATTTGCC
TTCGGTCAACAAGGGTTGCAAAGAAAGGGCAACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCCCATTTA
CAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATAGCAAATCATTCA
ACAAATTGATATCTTCTTTTAATGAAGACAATAATAATCAAACCATCGTCTCTACGACACGAGACCACCCTATTTCCCTT
GGCAACTGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAGGATTGA
AGATATCGCCCAAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAGGCTGGCTAAGTT
TTTGGGCTAGGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAAGTCAAAGCAGGCCGCTGC
ATCAACAAACTGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGCGCA
AAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCAAAATTTTCCTGCAAAACC
TTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTCAAAGTCGACAG
CCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATAGCGGCGTACAGCTGATCAAACTGAATGGAAGCAAGGATGA
GGTCGTCACTTTTGGAAACACCGGCAACAACGGCACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCCGACG
AGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTTAAATCAATTAACCGAGAACCA
GGCAAATACAGCCAAAGATACCGCATCCGCGAAAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGC
GGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCA
GCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCCAATATTTTGATAACGACACTTCCGCTCTCAAAGAC
TCCACCCTCGCCCAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGT
CTTGCGCCAAGTCGAACTGAGCGGGCAAAAACACGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCAGAGGCGCGTATG
CCTTGGATTTAAGCAAAATCAACGAAAATTATCCGGCCGCCGCTCCCCTGTTTGATGTCAAAAATGGCGATAATAACGGC
AAAAATCGCGTGAAAGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCGCAACGGCACATACTCCGC
CTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTGGCAGCGGCGATAATAAAACCGCGCTGTATGTATATGATTTGAAAA
ACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAAGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAA
GATTTGGACGGCACAGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGATTCCAA
TCCTGATAAATGGTCTGTAAGCACTATTTTCGAAGGCGGGAAGCCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAG
ACAAACGCGTCGTTATCTTCGGTACGGGCAGCGATTTGAGTGAAAGTGACGTATTCAATACGGACGAACAATATATTTAC
GGTATCTTTGACGACGATAAGGCGAATGTTAGTGTAAAGGTAAAAGACCACATGGGCGACGGGCTGCTCAAGCAAAACCT
TACGCAGGAAAATAAAACCTTGTTCCTGACAAATAATAAGGCATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAAT
TGAGGGAAGGAGAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATCCGCAAGTATAAAGAC
GACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCC
GATTGTGCCGGAAGCCAATACGGCTGTCGCACAATATTCCGGCCATAAGAAAACCGCCGGCGGCAAGTCCGTCCCTATAG
GTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGTTATCTGGAT
GAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAGGCGTCC
CGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGGGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCG
GCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (497-840)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.805	100	0.75