Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   U8955_RS01675 Genome accession   NZ_OY769914
Coordinates   298992..300752 (+) Length   586 a.a.
NCBI ID   WP_038804167.1    Uniprot ID   A0A7T2ZXS6
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 293992..305752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8955_RS01655 (SDENT7746_01685) - 295133..295849 (+) 717 WP_000532893.1 YebC/PmpR family DNA-binding transcriptional regulator -
  U8955_RS01660 (SDENT7746_01690) - 295897..296595 (-) 699 WP_038804170.1 CD20-like domain-containing protein -
  U8955_RS01665 (SDENT7746_01695) - 296788..297249 (+) 462 WP_038804169.1 MarR family winged helix-turn-helix transcriptional regulator -
  U8955_RS01670 (SDENT7746_01700) rcrP 297233..299002 (+) 1770 WP_038804168.1 ABC transporter ATP-binding protein Regulator
  U8955_RS01675 (SDENT7746_01705) rcrQ 298992..300752 (+) 1761 WP_038804167.1 ABC transporter ATP-binding protein Regulator
  U8955_RS01680 (SDENT7746_01710) - 300818..301180 (+) 363 WP_000078812.1 DUF2200 domain-containing protein -
  U8955_RS01685 (SDENT7746_01715) - 301177..301680 (+) 504 WP_038804166.1 phosphatase PAP2 family protein -
  U8955_RS01690 (SDENT7746_01720) - 301794..302240 (+) 447 WP_038804164.1 LytTR family DNA-binding domain-containing protein -
  U8955_RS01695 (SDENT7746_01725) - 302246..302920 (+) 675 WP_038804163.1 LiaF transmembrane domain-containing protein -
  U8955_RS01700 (SDENT7746_01730) rpmB 303025..303213 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  U8955_RS01705 (SDENT7746_01735) - 303366..303731 (+) 366 WP_038804162.1 Asp23/Gls24 family envelope stress response protein -
  U8955_RS01710 (SDENT7746_01740) - 303734..305398 (+) 1665 WP_038804161.1 DAK2 domain-containing protein -
  U8955_RS01715 (SDENT7746_01745) - 305523..305729 (+) 207 WP_000390701.1 hypothetical protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64619.35 Da        Isoelectric Point: 5.1186

>NTDB_id=1161704 U8955_RS01675 WP_038804167.1 298992..300752(+) (rcrQ) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLMTGIDLEAVSSIASFLVILYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLITM
FGMNWILALVTVVSTLVGFAAVSIIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLSNMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTDISDERMIEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=1161704 U8955_RS01675 WP_038804167.1 298992..300752(+) (rcrQ) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGGAAAATAAAAAAGTGTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTCCTAATAGCAGT
TGTGGCTGCAGTTATTTCAAGTATCATTACTGTTTATGGTCCAACTAAGATTAAAGAAATCACTAACTTGATTTCAGATG
GTTTGATGACAGGAATTGATTTAGAGGCTGTTTCAAGTATTGCTAGCTTTTTAGTGATTCTCTATGTATTTGGCGCCATC
CTTAATTATACCCAGGCCTATATCTTTTCAACGAGTATTCAGCATTTTTCAAAACGCTTGCGGACAGCAATCGCTGAAAA
GATTAATCGTTTGCCACTTGGCTATTTTGATCGTCATTCACAAGGAGACACCCTTTCGCGCGTGACCAATGATGTGGATA
CGGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTTTTGATTACCATG
TTTGGCATGAACTGGATTTTGGCATTGGTAACCGTTGTATCAACCCTTGTTGGTTTTGCGGCGGTTTCCATAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCCCAACAAAATAATCTAGCGGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ATAATGTAGTGACCAGCTACAACGCAGTGGACACCTCCAAAGCGAGATTTGCAGGTTTAAACCAAGACTTGCATGATAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGGGCCGCGCTGGCGTTAGAAGGACATATCACTATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCTCAAGGGATTACGAGCTTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCAGAGATGCAAGATGAATCTCACAAGGAAAGACAATTGAGCAACATGAAAGGGGAAGTAGTCTTTGA
TCACGTGTCCTTTGGCTATACACCAGAGCGCACCATCATCCATGATTTTTCTGCGACAGCTCATGCAGGTCAGAAGGTCG
CTATCGTTGGACCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTTTATGAGATTGATAAGGGAAGT
ATCCGCATCGACGGTGTGGATACCAAGGACATGAAGCGTTCGGAAGTACACGATGCATTTTCAATGGTCTTGCAGGACAC
TTGGCTCTTTGAAGGAACGATTCGAGAGAACTTGATCTATAATCAGACAGACATCAGTGATGAACGTATGATTGAAGCGT
CCAAAGCAGTAGGAATCCACCACTTTATCATGACTTTGCCAGACGGCTACGACACTGTTTTGGATGACACCGTAACCTTG
TCTGTTGGACAAAAACAACTTTTGACCATTGCTCGTGCCCTTCTCAAAGATGCACCGCTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAGGGTAGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCAACTATTCGTAATGCCGACTTGATTCTTGTCATGAAAGATGGCAATATCATCGAACAGGGCAAC
CATGAGGAACTGATGGCACAAGGTGGCTTCTATGCTGACTTGTACAATAGTCAGTTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T2ZXS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666

Multiple sequence alignment