Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   U8955_RS01670 Genome accession   NZ_OY769914
Coordinates   297233..299002 (+) Length   589 a.a.
NCBI ID   WP_038804168.1    Uniprot ID   A0A428BKJ3
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 292233..304002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8955_RS01645 (SDENT7746_01675) - 293002..293556 (-) 555 WP_038804172.1 GNAT family N-acetyltransferase -
  U8955_RS01650 (SDENT7746_01680) - 293666..295036 (+) 1371 WP_038804171.1 MATE family efflux transporter -
  U8955_RS01655 (SDENT7746_01685) - 295133..295849 (+) 717 WP_000532893.1 YebC/PmpR family DNA-binding transcriptional regulator -
  U8955_RS01660 (SDENT7746_01690) - 295897..296595 (-) 699 WP_038804170.1 CD20-like domain-containing protein -
  U8955_RS01665 (SDENT7746_01695) - 296788..297249 (+) 462 WP_038804169.1 MarR family winged helix-turn-helix transcriptional regulator -
  U8955_RS01670 (SDENT7746_01700) rcrP 297233..299002 (+) 1770 WP_038804168.1 ABC transporter ATP-binding protein Regulator
  U8955_RS01675 (SDENT7746_01705) rcrQ 298992..300752 (+) 1761 WP_038804167.1 ABC transporter ATP-binding protein Regulator
  U8955_RS01680 (SDENT7746_01710) - 300818..301180 (+) 363 WP_000078812.1 DUF2200 domain-containing protein -
  U8955_RS01685 (SDENT7746_01715) - 301177..301680 (+) 504 WP_038804166.1 phosphatase PAP2 family protein -
  U8955_RS01690 (SDENT7746_01720) - 301794..302240 (+) 447 WP_038804164.1 LytTR family DNA-binding domain-containing protein -
  U8955_RS01695 (SDENT7746_01725) - 302246..302920 (+) 675 WP_038804163.1 LiaF transmembrane domain-containing protein -
  U8955_RS01700 (SDENT7746_01730) rpmB 303025..303213 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  U8955_RS01705 (SDENT7746_01735) - 303366..303731 (+) 366 WP_038804162.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65326.72 Da        Isoelectric Point: 5.8013

>NTDB_id=1161703 U8955_RS01670 WP_038804168.1 297233..299002(+) (rcrP) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MKKLAKRITGKEWGMILLTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRSDVFHQVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDEKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSQVQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVAFKVEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DGVNVQDYNLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKETPLSEAAMWQALELAQSKAFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=1161703 U8955_RS01670 WP_038804168.1 297233..299002(+) (rcrP) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATTCTCCTTACGATTCTGTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTACCGACTTATATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTAGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGCGTTGCAGCATCTTATACAACCCACTTACGTAGTGACGTGTTTCATCAGGTTTTGGATTTTTCGCAGACAGAAATCAA
GCGCTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACCATGGGCTTGC
AAGTGGTCACTCGTGGGCCAATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGGAAATCGGAATACTGGCTCTGGGCA
GTAGTGGTGGCTGTTATTGTGAATGTCTTGATGACCACTGTTCTCATGACTCTGGCCTTTCCAAAACAATCTGTCATCCA
AAAATTGACAGATAAGCTCAATAGCATCACTCGTGAAAGTTTGACTGGGATTCGAGTTGTTCGTGCATACAATGCTGAGG
ATTATCAAGATGAAAAATTTGAAGCAGCCAATGATGAAGTGACGCGCCTCAATCTCTTTGTCAATCGATTGATGGCGATT
ATGAACCCGATTATGATGGCGATTTCCAGTGGACTAAGTTTAGCCATTTACTGGATCGGTGCCTATATCATCAACGATGC
AAGTTTGACAGAACGTCTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTGGTGATGGGATTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGTACCTTGGTTTCAGCAGGACGTATCAATCAAGTATTGGATTTGCAT
TCTTCTATTGAAAATCCTAGTCAAGTACAGACAGCGGATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGCTACTCTAAAAACTCAGAAGCAGTCGTGGAACATGTCGCTTTCAAAGTAGAAGCGGGTCAAACCGTGGCTTTCATCG
GATCGACTGGATCAGGAAAGTCCACCCTAGTCAACCTCTTGCCTCGTTTTTACGACGTTTCAGATGGAGAAATCCTAGTG
GATGGTGTCAATGTACAAGATTACAATTTGGAAGATTTGCGCAATAAGGTCGGCTATATCCCTCAAAAAGCAGTCCTCTT
CTCAGGAGATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAACTCCTCTAAGCGAGGCTGCTATGTGGCAAGCTC
TTGAATTGGCCCAGTCTAAAGCATTTATCGAGGACAAGGAAGCAGGTCTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACTGATCGTGTCCTTCGCCAAGAGCTAGCTGAGAAAACAAAATCCATGACCAAGCTCA
TCGTAGCGCAGCGGATTTCTACCATTATGGACGCCGACCTGATCTTAGTTTTGGATCAAGGAAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A428BKJ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.225

100

0.666

Multiple sequence alignment