Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AABJ57_RS07125 | Genome accession | NZ_OY754859 |
| Coordinates | 1329440..1329745 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli isolate Reference | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1324440..1334745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ57_RS07090 | - | 1324855..1325616 (+) | 762 | WP_025431509.1 | ATP-binding protein | - |
| AABJ57_RS07095 | - | 1325613..1326296 (+) | 684 | WP_002791740.1 | 3-methyladenine DNA glycosylase | - |
| AABJ57_RS07100 | thiD | 1326296..1327108 (+) | 813 | WP_002822374.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AABJ57_RS07105 | thiE | 1327098..1327730 (+) | 633 | WP_052785692.1 | thiamine phosphate synthase | - |
| AABJ57_RS07110 | - | 1327708..1328337 (+) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| AABJ57_RS07115 | - | 1328330..1328782 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| AABJ57_RS07120 | - | 1328779..1329447 (-) | 669 | WP_002797569.1 | hypothetical protein | - |
| AABJ57_RS07125 | ctsT | 1329440..1329745 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| AABJ57_RS07130 | proC | 1329742..1330479 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AABJ57_RS07135 | fliW | 1330479..1330868 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| AABJ57_RS07140 | bamD | 1331032..1331679 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| AABJ57_RS07145 | lon | 1331695..1334070 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| AABJ57_RS07150 | rpsR | 1334126..1334386 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=1161382 AABJ57_RS07125 WP_002777852.1 1329440..1329745(-) (ctsT) [Campylobacter coli isolate Reference]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=1161382 AABJ57_RS07125 WP_002777852.1 1329440..1329745(-) (ctsT) [Campylobacter coli isolate Reference]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |