Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   Q7F15_RS02795 Genome accession   NZ_OY569118
Coordinates   571444..572397 (+) Length   317 a.a.
NCBI ID   WP_304415073.1    Uniprot ID   A0AA48RFZ5
Organism   Brevibacillus aydinogluensis strain 4475 isolate 4475     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 566444..577397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7F15_RS02785 (BSPP4475_02800) - 567295..569238 (+) 1944 WP_304415071.1 TOMM precursor leader peptide-binding protein -
  Q7F15_RS02790 (BSPP4475_02805) - 569260..570837 (+) 1578 WP_304415072.1 SagB family peptide dehydrogenase -
  Q7F15_RS02795 (BSPP4475_02810) ceuB 571444..572397 (+) 954 WP_304415073.1 ABC transporter permease Machinery gene
  Q7F15_RS02800 (BSPP4475_02815) - 572387..573337 (+) 951 WP_304415074.1 iron chelate uptake ABC transporter family permease subunit -
  Q7F15_RS02805 (BSPP4475_02820) - 573331..574089 (+) 759 WP_171566290.1 ABC transporter ATP-binding protein -
  Q7F15_RS02810 (BSPP4475_02825) - 574277..575203 (+) 927 WP_171566345.1 siderophore ABC transporter substrate-binding protein -
  Q7F15_RS02815 (BSPP4475_02830) - 575447..576457 (+) 1011 WP_230077431.1 LLM class flavin-dependent oxidoreductase -
  Q7F15_RS02820 (BSPP4475_02835) - 576579..577124 (-) 546 WP_171566288.1 GbsR/MarR family transcriptional regulator -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34804.91 Da        Isoelectric Point: 10.0586

>NTDB_id=1160266 Q7F15_RS02795 WP_304415073.1 571444..572397(+) (ceuB) [Brevibacillus aydinogluensis strain 4475 isolate 4475]
MKKRYLFTALIALSVTSIFIGVKDISPLDLFGLREDQAQILLVSRLPRLISIIMAGASMSICGLIMQQLSRNKFVSPTTA
GTLDSARLGVLVSLLLFTSASPLQKMIVAFAFALIGTFVFMKILDRIKMKDSIFIPLVGLMFGNIITSISTFFAYKYDLI
QNISSWLQGDFSMIMKGRYELLYISIPLLILAYLYANKFTVAGMGEEFSKNLGLNYKQVVNVGLIIVALVTSSVVLTVGT
IPFLGLIIPNIVSLYMGDHLKKSLAHTALLGAVFVLFCDILGRIIIYPYEISISLTVGVIGSGIFAYLLMRRQAHGG

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1160266 Q7F15_RS02795 WP_304415073.1 571444..572397(+) (ceuB) [Brevibacillus aydinogluensis strain 4475 isolate 4475]
ATGAAAAAGAGATATCTGTTTACTGCGCTTATCGCACTATCGGTTACATCCATTTTCATCGGCGTCAAGGACATCTCCCC
GCTGGATCTGTTCGGCCTTCGTGAAGACCAGGCGCAGATCTTGTTGGTCAGCAGACTGCCTCGACTGATCAGCATTATCA
TGGCGGGCGCGAGTATGAGCATCTGCGGATTGATCATGCAGCAGCTCAGCCGCAACAAGTTTGTCTCCCCGACGACGGCG
GGAACGCTGGACTCGGCCAGGCTGGGTGTGTTGGTATCCTTGCTGCTCTTTACGAGCGCAAGTCCTCTGCAAAAGATGAT
TGTTGCGTTTGCATTTGCGCTAATCGGAACATTCGTGTTTATGAAAATTCTTGATCGAATCAAGATGAAAGACTCCATTT
TTATCCCGCTTGTGGGGCTGATGTTTGGCAACATCATTACGTCCATTTCTACCTTTTTTGCGTACAAATACGACCTGATT
CAAAACATATCGTCTTGGCTCCAAGGGGATTTCTCAATGATTATGAAAGGCAGATATGAACTGCTGTACATAAGCATTCC
GCTGCTCATCCTCGCGTACCTGTACGCCAACAAGTTTACCGTGGCAGGGATGGGAGAGGAATTTTCCAAAAACCTGGGGC
TGAACTACAAGCAAGTGGTGAATGTCGGGTTAATCATCGTCGCTCTGGTGACGTCGTCCGTGGTATTGACGGTGGGAACG
ATTCCGTTCCTGGGGTTGATTATCCCAAACATCGTCAGCCTCTACATGGGCGATCATCTGAAGAAAAGCCTTGCTCACAC
GGCTTTGCTGGGTGCAGTCTTCGTCCTGTTTTGCGACATACTCGGCCGGATCATTATTTATCCGTACGAGATTTCCATCA
GTCTTACCGTTGGGGTCATCGGAAGCGGCATTTTTGCGTACTTGTTGATGAGGAGACAGGCACATGGGGGATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.355

98.738

0.527

Multiple sequence alignment