Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   QOY19_RS02780 Genome accession   NZ_OX595791
Coordinates   493527..494600 (+) Length   357 a.a.
NCBI ID   WP_000796095.1    Uniprot ID   A0A0E1EG10
Organism   Streptococcus agalactiae isolate MRI Z2-270     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 488527..499600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOY19_RS02750 - 489420..490484 (+) 1065 WP_000021304.1 MmcQ/YjbR family DNA-binding protein -
  QOY19_RS02755 asnA 490598..491590 (+) 993 WP_000748011.1 aspartate--ammonia ligase -
  QOY19_RS02760 - 491635..492084 (-) 450 WP_000592263.1 thiol reductase thioredoxin -
  QOY19_RS02765 rsmD 492214..492753 (+) 540 WP_001266831.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QOY19_RS02770 - 492765..493055 (+) 291 WP_000384889.1 hypothetical protein -
  QOY19_RS02775 coaD 493052..493537 (+) 486 WP_000161892.1 pantetheine-phosphate adenylyltransferase -
  QOY19_RS02780 sepM 493527..494600 (+) 1074 WP_000796095.1 SepM family pheromone-processing serine protease Regulator
  QOY19_RS02785 - 494675..496007 (+) 1333 Protein_465 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  QOY19_RS02790 - 496076..496654 (+) 579 WP_283708345.1 YutD-like domain-containing protein -
  QOY19_RS02795 rlmN 496705..497811 (+) 1107 WP_001124990.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QOY19_RS02800 - 497811..498326 (+) 516 WP_000919803.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39199.43 Da        Isoelectric Point: 10.4385

>NTDB_id=1159914 QOY19_RS02780 WP_000796095.1 493527..494600(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-270]
MKNRDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESIYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVLSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=1159914 QOY19_RS02780 WP_000796095.1 493527..494600(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-270]
GTGAAGAATAGAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTAGTGAGACTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCATCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATTATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E1EG10

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.322

94.958

0.658


Multiple sequence alignment