Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QOY19_RS02245 Genome accession   NZ_OX595791
Coordinates   391483..392208 (+) Length   241 a.a.
NCBI ID   WP_283708335.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-270     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 386483..397208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOY19_RS02210 tsaE 387286..387729 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QOY19_RS02215 - 387722..388243 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  QOY19_RS02220 - 388252..389559 (+) 1308 WP_000708156.1 LCP family protein -
  QOY19_RS02225 - 389623..389919 (-) 297 WP_000690175.1 hypothetical protein -
  QOY19_RS02230 - 389916..390335 (-) 420 WP_000368097.1 HIT family protein -
  QOY19_RS02235 - 390671..391174 (+) 504 WP_000773453.1 hypothetical protein -
  QOY19_RS02240 - 391226..391411 (-) 186 WP_000368100.1 hypothetical protein -
  QOY19_RS02245 pptA 391483..392208 (+) 726 WP_283708335.1 ABC transporter ATP-binding protein Regulator
  QOY19_RS02250 pptB 392210..393244 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  QOY19_RS02255 - 393302..394102 (+) 801 WP_000155919.1 phosphotransferase family protein -
  QOY19_RS02260 trmB 394092..394727 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QOY19_RS02270 rimP 395217..395693 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  QOY19_RS02275 nusA 395729..396880 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  QOY19_RS02280 - 396902..397198 (+) 297 WP_001140526.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26883.30 Da        Isoelectric Point: 4.5704

>NTDB_id=1159912 QOY19_RS02245 WP_283708335.1 391483..392208(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-270]
MLKIENVTGGYFNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1159912 QOY19_RS02245 WP_283708335.1 391483..392208(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-270]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATTTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAGCTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768

Multiple sequence alignment