Detailed information NTG1159444

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QOS64_RS08770
• Genome accession: NZ_OX460973
• Coordinates: 1738832..1739968 (-)
• Length: 378 a.a.
• NCBI ID: WP_283637829.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1733832..1744968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOS64_RS08730	-	1734367..1734585 (+)	219	WP_014417667.1	helix-turn-helix transcriptional regulator	-
QOS64_RS08735	-	1734633..1734914 (+)	282	WP_224960723.1	hypothetical protein	-
QOS64_RS08740	-	1734966..1735211 (-)	246	WP_041481754.1	helix-turn-helix domain-containing protein	-
QOS64_RS08745	-	1735713..1736432 (+)	720	WP_257730838.1	hypothetical protein	-
QOS64_RS08750	-	1736466..1736774 (-)	309	WP_257730839.1	hypothetical protein	-
QOS64_RS08755	-	1736787..1738211 (-)	1425	WP_257730840.1	lipase	-
QOS64_RS08760	-	1738261..1738626 (+)	366	WP_014417672.1	DUF1433 domain-containing protein	-
QOS64_RS08765	-	1738669..1738842 (-)	174	WP_257730841.1	hypothetical protein	-
QOS64_RS08770	rapC	1738832..1739968 (-)	1137	WP_283637829.1	aspartate phosphatase	Regulator
QOS64_RS08775	-	1740150..1740980 (-)	831	WP_257730843.1	SHOCT domain-containing protein	-
QOS64_RS08780	-	1741146..1743785 (-)	2640	WP_257730844.1	phage tail protein	-
QOS64_RS08785	-	1743800..1744555 (-)	756	WP_215532427.1	phage tail domain-containing protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44673.00 Da
• Isoelectric Point: 4.8237

>NTDB_id=1159444 QOS64_RS08770 WP_283637829.1 1738832..1739968(-) (rapC) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
MKQLISSSKVGVKINEWYKYIRMFSVPDAEVMKSEVEQEINAMEEDQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPEIS
DLLEKIESSQAKLKGILEYYFNFFRGMYEFEEYEYLKAISFYKQAEKKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIESYRAHETYSVREIQCSFVIGLNYLDMEYPEKAIPHFQKAYKKALEIDMPRLAGSALYNLGISSFSEEKFDEAI
EYFKEGVLVYEQNGYEHANRLLDILFMLAKTNFKVNKKTEGTAVYNHGLSLAKNLNDEVLTKMFDFLNALYIDDNKETLN
EILAYLEFKTMFSDVEDLATDAAKYYTKNEDHKAAGLFYEKVLYAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=1159444 QOS64_RS08770 WP_283637829.1 1738832..1739968(-) (rapC) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
TTGAAACAGTTAATCTCCTCATCAAAAGTCGGCGTGAAGATTAATGAGTGGTACAAGTATATTCGTATGTTTAGTGTTCC
TGATGCAGAGGTGATGAAATCAGAAGTTGAACAAGAAATAAACGCTATGGAAGAAGATCAAGATTTATTGTTATACTATT
CGCTCATGTGTTTTCGACATCAATTAATGCTTGATTATCTTGAGCCAAAAACCATGAATGAAGAACGACCTGAGATTTCT
GACTTATTAGAAAAGATTGAAAGTAGCCAAGCTAAATTGAAAGGAATTCTTGAATATTACTTTAACTTTTTCCGTGGGAT
GTATGAATTTGAAGAATACGAATATCTTAAAGCGATAAGTTTTTACAAACAAGCGGAAAAGAAGCTGTCACTTGTAGCCG
ACGAAATTGAGCGAGCGGAGTTTCATTACAAAGTCGCTGAAATTTATTATCACATGAAACAAACACACATGTCGATGCAC
CATATTGTTCAAGCAATTGAAAGCTACAGAGCGCATGAAACCTATTCTGTTAGAGAAATTCAATGTTCTTTTGTTATTGG
TCTAAATTATTTAGACATGGAGTATCCAGAAAAGGCTATCCCTCATTTTCAAAAAGCTTATAAAAAAGCACTTGAAATTG
ATATGCCAAGATTAGCCGGATCCGCTCTATATAATTTAGGGATTTCCTCTTTTTCTGAAGAAAAGTTCGACGAGGCTATT
GAGTATTTCAAAGAAGGAGTGTTGGTCTATGAGCAAAACGGATATGAACATGCTAACCGCTTATTAGACATTCTTTTCAT
GTTAGCGAAAACGAACTTTAAGGTAAATAAGAAAACTGAAGGAACAGCTGTTTATAATCATGGACTGTCATTGGCTAAAA
ACTTAAATGATGAAGTATTAACCAAAATGTTTGATTTCCTAAATGCCCTTTACATTGACGATAACAAAGAAACACTAAAT
GAGATTCTTGCTTATTTAGAATTTAAAACAATGTTTTCCGATGTGGAGGACTTAGCAACCGACGCAGCGAAGTATTATAC
AAAAAATGAAGACCATAAAGCGGCTGGATTATTTTACGAGAAAGTGCTTTATGCCCAAAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (222-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.148	100	0.481
rapF	Bacillus subtilis subsp. subtilis str. 168	45.407	100	0.458