Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QOS64_RS07385 Genome accession   NZ_OX460973
Coordinates   1424476..1425072 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1419476..1430072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOS64_RS07355 - 1419688..1420143 (+) 456 WP_007409622.1 flavodoxin -
  QOS64_RS07360 dapD 1420225..1420935 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QOS64_RS07365 - 1421006..1422130 (+) 1125 WP_012117444.1 N-acetyldiaminopimelate deacetylase -
  QOS64_RS07370 - 1422191..1422436 (+) 246 WP_003154596.1 YkuS family protein -
  QOS64_RS07375 - 1422470..1423276 (-) 807 WP_032874739.1 mechanosensitive ion channel family protein -
  QOS64_RS07380 - 1423565..1424023 (+) 459 WP_168985022.1 TlpA disulfide reductase family protein -
  QOS64_RS07385 rok 1424476..1425072 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  QOS64_RS07390 - 1425093..1426085 (-) 993 WP_012117448.1 hypothetical protein -
  QOS64_RS07395 - 1426231..1426833 (+) 603 WP_039251605.1 molybdenum cofactor guanylyltransferase -
  QOS64_RS07400 - 1426885..1427904 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  QOS64_RS07405 glp 1427922..1429214 (+) 1293 WP_136396331.1 gephyrin-like molybdotransferase Glp -
  QOS64_RS07410 mobB 1429175..1429696 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=1159440 QOS64_RS07385 WP_012117447.1 1424476..1425072(+) (rok) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1159440 QOS64_RS07385 WP_012117447.1 1424476..1425072(+) (rok) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment