Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QOR61_RS04420 Genome accession   NZ_OX460960
Coordinates   797937..798746 (+) Length   269 a.a.
NCBI ID   WP_001289498.1    Uniprot ID   X5KFV3
Organism   Streptococcus agalactiae isolate MRI Z2-299     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 792937..803746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR61_RS04395 - 793266..793961 (-) 696 WP_000173639.1 amino acid ABC transporter permease -
  QOR61_RS04400 - 793974..794774 (-) 801 WP_000946170.1 transporter substrate-binding domain-containing protein -
  QOR61_RS04405 - 794786..795541 (-) 756 WP_000053150.1 amino acid ABC transporter ATP-binding protein -
  QOR61_RS04410 vicR 795881..796591 (+) 711 WP_000722052.1 response regulator YycF Regulator
  QOR61_RS04415 vicK 796584..797933 (+) 1350 WP_001065469.1 cell wall metabolism sensor histidine kinase VicK Regulator
  QOR61_RS04420 vicX 797937..798746 (+) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  QOR61_RS04425 - 798749..799117 (+) 369 WP_000719384.1 YbaN family protein -
  QOR61_RS04430 rnc 799293..799979 (+) 687 WP_000661526.1 ribonuclease III -
  QOR61_RS04435 smc 799987..803526 (+) 3540 WP_283572444.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30273.24 Da        Isoelectric Point: 6.2265

>NTDB_id=1159313 QOR61_RS04420 WP_001289498.1 797937..798746(+) (vicX) [Streptococcus agalactiae isolate MRI Z2-299]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAS
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1159313 QOR61_RS04420 WP_001289498.1 797937..798746(+) (vicX) [Streptococcus agalactiae isolate MRI Z2-299]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATTGACGCTGGTTTAACAGGCAAGAAAGTGACTAGCCTTCTTGCAGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATACTAGTTACCCACGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCCAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGCAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTAAAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAAGC
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCCTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGAGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCACCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5KFV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment