Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   QOR58_RS02735 Genome accession   NZ_OX460941
Coordinates   484389..485462 (+) Length   357 a.a.
NCBI ID   WP_154704857.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-304     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 479389..490462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR58_RS02705 asnA 480235..481227 (+) 993 WP_000748016.1 aspartate--ammonia ligase -
  QOR58_RS02710 - 481340..482445 (+) 1106 WP_154704856.1 IS3-like element ISSag2 family transposase -
  QOR58_RS02715 - 482517..482945 (-) 429 WP_000592259.1 hypothetical protein -
  QOR58_RS02720 rsmD 483076..483615 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QOR58_RS02725 - 483627..483917 (+) 291 WP_000384889.1 hypothetical protein -
  QOR58_RS02730 coaD 483914..484399 (+) 486 WP_000161892.1 pantetheine-phosphate adenylyltransferase -
  QOR58_RS02735 sepM 484389..485462 (+) 1074 WP_154704857.1 SepM family pheromone-processing serine protease Regulator
  QOR58_RS02740 - 485537..486869 (+) 1333 Protein_455 metallophosphoesterase -
  QOR58_RS02745 - 486938..487516 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  QOR58_RS02750 rlmN 487567..488673 (+) 1107 WP_001124990.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QOR58_RS02755 - 488673..489188 (+) 516 WP_000919802.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39179.35 Da        Isoelectric Point: 10.4286

>NTDB_id=1159130 QOR58_RS02735 WP_154704857.1 484389..485462(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-304]
MKNKDPKRKHKTLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVFYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=1159130 QOR58_RS02735 WP_154704857.1 484389..485462(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-304]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAACTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTTTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGCACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.732

94.958

0.653


Multiple sequence alignment