Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QOR58_RS02230 Genome accession   NZ_OX460941
Coordinates   387772..388497 (+) Length   241 a.a.
NCBI ID   WP_000912310.1    Uniprot ID   A0AB74H7X3
Organism   Streptococcus agalactiae isolate MRI Z2-304     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 382772..393497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR58_RS02195 tsaE 383576..384019 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QOR58_RS02200 - 384012..384533 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  QOR58_RS02205 - 384542..385849 (+) 1308 WP_000708160.1 LCP family protein -
  QOR58_RS02210 - 385913..386209 (-) 297 WP_000690175.1 hypothetical protein -
  QOR58_RS02215 - 386206..386625 (-) 420 WP_000368097.1 HIT family protein -
  QOR58_RS02220 - 386961..387464 (+) 504 WP_000773455.1 hypothetical protein -
  QOR58_RS02225 - 387516..387700 (-) 185 Protein_363 hypothetical protein -
  QOR58_RS02230 pptA 387772..388497 (+) 726 WP_000912310.1 ABC transporter ATP-binding protein Regulator
  QOR58_RS02235 - 388499..389533 (+) 1035 WP_283571503.1 ABC transporter permease -
  QOR58_RS02240 - 389591..390391 (+) 801 WP_000155919.1 phosphotransferase family protein -
  QOR58_RS02245 trmB 390381..391016 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QOR58_RS02255 rimP 391506..391982 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  QOR58_RS02260 nusA 392018..393169 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  QOR58_RS02265 - 393191..393487 (+) 297 WP_001140526.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26893.30 Da        Isoelectric Point: 4.5217

>NTDB_id=1159129 QOR58_RS02230 WP_000912310.1 387772..388497(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-304]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMERAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1159129 QOR58_RS02230 WP_000912310.1 387772..388497(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-304]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAATTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAAACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACTGA
TGAAGTTATGGAACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACGCACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768

Multiple sequence alignment