Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   QOR62_RS02725 Genome accession   NZ_OX460940
Coordinates   477103..478176 (+) Length   357 a.a.
NCBI ID   WP_000790651.1    Uniprot ID   A0AAW6XPT9
Organism   Streptococcus agalactiae isolate MRI Z2-179     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 472103..483176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR62_RS02695 - 472994..474058 (+) 1065 WP_000021293.1 MmcQ/YjbR family DNA-binding protein -
  QOR62_RS02700 asnA 474173..475165 (+) 993 WP_000748015.1 aspartate--ammonia ligase -
  QOR62_RS02705 - 475210..475659 (-) 450 WP_000592261.1 hypothetical protein -
  QOR62_RS02710 rsmD 475790..476329 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QOR62_RS02715 - 476341..476631 (+) 291 WP_000384889.1 hypothetical protein -
  QOR62_RS02720 coaD 476628..477113 (+) 486 WP_000161894.1 pantetheine-phosphate adenylyltransferase -
  QOR62_RS02725 sepM 477103..478176 (+) 1074 WP_000790651.1 SepM family pheromone-processing serine protease Regulator
  QOR62_RS02730 - 478251..479585 (+) 1335 WP_000137518.1 metallophosphoesterase -
  QOR62_RS02735 - 479654..480232 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  QOR62_RS02740 rlmN 480283..481389 (+) 1107 WP_000039434.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QOR62_RS02745 - 481389..481904 (+) 516 WP_000919803.1 VanZ family protein -

Sequence

Protein


Download         Length: 357 a.a.        Molecular weight: 39131.31 Da        Isoelectric Point: 10.4286

>NTDB_id=1159079 QOR62_RS02725 WP_000790651.1 477103..478176(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-179]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=1159079 QOR62_RS02725 WP_000790651.1 477103..478176(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-179]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTTTCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCGGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(137-203)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(241-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655

Multiple sequence alignment