Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   QOR45_RS03025 Genome accession   NZ_OX460935
Coordinates   532062..533135 (+) Length   357 a.a.
NCBI ID   WP_000790653.1    Uniprot ID   A0A7Z7K6V3
Organism   Streptococcus agalactiae isolate MRI Z2-286     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 527062..538135
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR45_RS02995 - 527953..529017 (+) 1065 WP_000021298.1 MmcQ/YjbR family DNA-binding protein -
  QOR45_RS03000 asnA 529132..530124 (+) 993 WP_000748011.1 aspartate--ammonia ligase -
  QOR45_RS03005 - 530169..530618 (-) 450 WP_283572091.1 bacteriocin transport accessory protein -
  QOR45_RS03010 rsmD 530749..531288 (+) 540 WP_032459123.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QOR45_RS03015 - 531300..531590 (+) 291 WP_000384889.1 hypothetical protein -
  QOR45_RS03020 coaD 531587..532072 (+) 486 WP_000161887.1 pantetheine-phosphate adenylyltransferase -
  QOR45_RS03025 sepM 532062..533135 (+) 1074 WP_000790653.1 SepM family pheromone-processing serine protease Regulator
  QOR45_RS03030 - 533210..534544 (+) 1335 WP_000137514.1 bifunctional metallophosphatase/5'-nucleotidase -
  QOR45_RS03035 - 534613..535191 (+) 579 WP_001224503.1 YutD-like domain-containing protein -
  QOR45_RS03040 rlmN 535242..536348 (+) 1107 WP_001124994.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QOR45_RS03045 - 536348..536863 (+) 516 WP_000919809.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39176.40 Da        Isoelectric Point: 10.4619

>NTDB_id=1158977 QOR45_RS03025 WP_000790653.1 532062..533135(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-286]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSNVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGFKVVSAAKKGMDIFFVPNNPIDKNAKKGKIKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=1158977 QOR45_RS03025 WP_000790653.1 532062..533135(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-286]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGACTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTTAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGTAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTAATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTTAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAATAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7Z7K6V3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.732

94.958

0.653


Multiple sequence alignment