Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QOR46_RS02085 Genome accession   NZ_OX460934
Coordinates   364007..364732 (+) Length   241 a.a.
NCBI ID   WP_000912310.1    Uniprot ID   A0AB74H7X3
Organism   Streptococcus agalactiae isolate MRI Z2-335     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 359007..369732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR46_RS02050 tsaE 359809..360252 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QOR46_RS02055 - 360245..360766 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  QOR46_RS02060 - 360775..362082 (+) 1308 WP_283571796.1 LCP family protein -
  QOR46_RS02065 - 362146..362442 (-) 297 WP_000690175.1 hypothetical protein -
  QOR46_RS02070 - 362439..362858 (-) 420 WP_000368097.1 HIT family protein -
  QOR46_RS02075 - 363194..363697 (+) 504 WP_000773453.1 hypothetical protein -
  QOR46_RS02080 - 363749..363935 (-) 187 Protein_334 hypothetical protein -
  QOR46_RS02085 pptA 364007..364732 (+) 726 WP_000912310.1 ABC transporter ATP-binding protein Regulator
  QOR46_RS02090 pptB 364734..365768 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  QOR46_RS02095 - 365826..366626 (+) 801 WP_000155919.1 phosphotransferase family protein -
  QOR46_RS02100 trmB 366616..367251 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QOR46_RS02110 rimP 367741..368217 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  QOR46_RS02115 nusA 368253..369404 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  QOR46_RS02120 - 369426..369722 (+) 297 WP_001140526.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26893.30 Da        Isoelectric Point: 4.5217

>NTDB_id=1158920 QOR46_RS02085 WP_000912310.1 364007..364732(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-335]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMERAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1158920 QOR46_RS02085 WP_000912310.1 364007..364732(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-335]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGAACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACGCACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768

Multiple sequence alignment