Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   QOR55_RS10395 Genome accession   NZ_OX460911
Coordinates   2060820..2061593 (+) Length   257 a.a.
NCBI ID   WP_000456085.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-322     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2055820..2066593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR55_RS10385 rlmH 2058813..2059292 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QOR55_RS10390 htrA 2059493..2060722 (+) 1230 WP_000728357.1 trypsin-like peptidase domain-containing protein Regulator
  QOR55_RS10395 spo0J 2060820..2061593 (+) 774 WP_000456085.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29283.72 Da        Isoelectric Point: 9.6926

>NTDB_id=1158848 QOR55_RS10395 WP_000456085.1 2060820..2061593(+) (spo0J) [Streptococcus agalactiae isolate MRI Z2-322]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFDNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1158848 QOR55_RS10395 WP_000456085.1 2060820..2061593(+) (spo0J) [Streptococcus agalactiae isolate MRI Z2-322]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572


Multiple sequence alignment