Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   QOR55_RS02675 Genome accession   NZ_OX460911
Coordinates   474169..475242 (+) Length   357 a.a.
NCBI ID   WP_017647063.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-322     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 469169..480242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR55_RS02645 - 470060..471124 (+) 1065 WP_017647059.1 MmcQ/YjbR family DNA-binding protein -
  QOR55_RS02650 asnA 471239..472231 (+) 993 WP_017647060.1 aspartate--ammonia ligase -
  QOR55_RS02655 - 472276..472725 (-) 450 WP_017647061.1 thiol reductase thioredoxin -
  QOR55_RS02660 rsmD 472856..473395 (+) 540 WP_032459139.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QOR55_RS02665 - 473407..473697 (+) 291 WP_000384889.1 hypothetical protein -
  QOR55_RS02670 coaD 473694..474179 (+) 486 WP_000161892.1 pantetheine-phosphate adenylyltransferase -
  QOR55_RS02675 sepM 474169..475242 (+) 1074 WP_017647063.1 SepM family pheromone-processing serine protease Regulator
  QOR55_RS02680 - 475317..476651 (+) 1335 WP_017647064.1 bifunctional metallophosphatase/5'-nucleotidase -
  QOR55_RS02685 - 476721..477299 (+) 579 WP_017647065.1 YutD-like domain-containing protein -
  QOR55_RS02690 rlmN 477350..478456 (+) 1107 WP_017647066.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QOR55_RS02695 - 478456..478971 (+) 516 WP_000919803.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39159.41 Da        Isoelectric Point: 10.4516

>NTDB_id=1158817 QOR55_RS02675 WP_017647063.1 474169..475242(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-322]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESIYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKKAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=1158817 QOR55_RS02675 WP_017647063.1 474169..475242(+) (sepM) [Streptococcus agalactiae isolate MRI Z2-322]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCATCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGACATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAAAGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.322

94.958

0.658


Multiple sequence alignment