Detailed information NTG1158717

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: QOR56_RS01070
• Genome accession: NZ_OX460906
• Coordinates: 173493..174425 (+)
• Length: 310 a.a.
• NCBI ID: WP_000138506.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-265
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 168493..179425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR56_RS01050	-	168705..170360 (+)	1656	WP_115343100.1	peptide ABC transporter substrate-binding protein	-
QOR56_RS01055	-	170479..171393 (+)	915	WP_000598965.1	ABC transporter permease	-
QOR56_RS01060	-	171403..172434 (+)	1032	WP_283572030.1	ABC transporter permease	-
QOR56_RS01065	oppD	172447..173493 (+)	1047	WP_283572031.1	ABC transporter ATP-binding protein	Regulator
QOR56_RS01070	amiF	173493..174425 (+)	933	WP_000138506.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34855.67 Da
• Isoelectric Point: 6.7314

>NTDB_id=1158717 QOR56_RS01070 WP_000138506.1 173493..174425(+) (amiF) [Streptococcus agalactiae isolate MRI Z2-265]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=1158717 QOR56_RS01070 WP_000138506.1 173493..174425(+) (amiF) [Streptococcus agalactiae isolate MRI Z2-265]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTAATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGACATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCCATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAATCCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACACCTGGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.545	99.355	0.542
amiF	Streptococcus thermophilus LMG 18311	54.221	99.355	0.539
amiF	Streptococcus salivarius strain HSISS4	54.426	98.387	0.535