Detailed information NTG1158242

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: QNH83_RS05920
• Genome accession: NZ_OX437060
• Coordinates: 1113463..1114422 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1108463..1119422

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH83_RS05900	neuC	1109030..1110145 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
QNH83_RS09355	-	1110142..1111056 (+)	915	Protein_1146	beta-1,4-N-acetylgalactosaminyltransferase	-
QNH83_RS09360	-	1111090..1111752 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
QNH83_RS05910	-	1111747..1112596 (-)	850	Protein_1148	glycosyltransferase	-
QNH83_RS05915	waaV	1112580..1113404 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
QNH83_RS05920	waaF	1113463..1114422 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
QNH83_RS05925	gmhA	1114403..1114963 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
QNH83_RS05930	rfaE1	1114960..1116345 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
QNH83_RS05935	rfaD	1116338..1117291 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
QNH83_RS05940	gmhB	1117292..1117852 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
QNH83_RS05945	-	1117934..1118236 (+)	303	WP_002852762.1	cytochrome c	-
QNH83_RS05950	ccoS	1118259..1118465 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1158242 QNH83_RS05920 WP_002875425.1 1113463..1114422(+) (waaF) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1158242 QNH83_RS05920 WP_002875425.1 1113463..1114422(+) (waaF) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1