Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QNH83_RS05575 | Genome accession | NZ_OX437060 |
| Coordinates | 1043290..1043592 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1038290..1048592
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNH83_RS05550 | rpsR | 1038653..1038913 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| QNH83_RS05555 | lon | 1038973..1041348 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| QNH83_RS05560 | - | 1041365..1042012 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| QNH83_RS05565 | fliW | 1042173..1042562 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QNH83_RS05570 | proC | 1042562..1043293 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QNH83_RS05575 | ctsT | 1043290..1043592 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| QNH83_RS05580 | - | 1043589..1044251 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| QNH83_RS05585 | - | 1044248..1044700 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| QNH83_RS05590 | hemD | 1044697..1045326 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| QNH83_RS05595 | thiE | 1045304..1045936 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| QNH83_RS05600 | thiD | 1045926..1046738 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QNH83_RS05605 | - | 1046735..1047421 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| QNH83_RS05610 | - | 1047418..1048179 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1158240 QNH83_RS05575 WP_002853046.1 1043290..1043592(+) (ctsT) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1158240 QNH83_RS05575 WP_002853046.1 1043290..1043592(+) (ctsT) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |