Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QOR50_RS05300 | Genome accession | NZ_OX437059 |
| Coordinates | 1010366..1010668 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1005366..1015668
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QOR50_RS05275 | rpsR | 1005729..1005989 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| QOR50_RS05280 | lon | 1006049..1008424 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| QOR50_RS05285 | - | 1008441..1009088 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| QOR50_RS05290 | fliW | 1009249..1009638 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QOR50_RS05295 | proC | 1009638..1010369 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QOR50_RS05300 | ctsT | 1010366..1010668 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| QOR50_RS05305 | - | 1010665..1011327 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| QOR50_RS05310 | - | 1011324..1011776 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| QOR50_RS05315 | hemD | 1011773..1012402 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| QOR50_RS05320 | thiE | 1012380..1013012 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| QOR50_RS05325 | thiD | 1013002..1013814 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QOR50_RS05330 | - | 1013811..1014497 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| QOR50_RS05335 | - | 1014494..1015255 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1158212 QOR50_RS05300 WP_002853046.1 1010366..1010668(+) (ctsT) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1158212 QOR50_RS05300 WP_002853046.1 1010366..1010668(+) (ctsT) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |