Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   QOR50_RS03350 Genome accession   NZ_OX437059
Coordinates   636794..637231 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 631794..642231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR50_RS03320 - 632291..632803 (+) 513 WP_250484727.1 hypothetical protein -
  QOR50_RS03325 - 632844..633752 (+) 909 WP_250484729.1 DUF4118 domain-containing protein -
  QOR50_RS03330 - 633960..634106 (+) 147 WP_224168554.1 hypothetical protein -
  QOR50_RS03335 uvrB 634208..636181 (-) 1974 WP_038816456.1 excinuclease ABC subunit UvrB -
  QOR50_RS03340 - 636335..636565 (+) 231 WP_002852327.1 hypothetical protein -
  QOR50_RS03345 - 636555..636797 (+) 243 WP_002854947.1 hypothetical protein -
  QOR50_RS03350 Cj0683 636794..637231 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  QOR50_RS03355 priA 637213..639066 (+) 1854 WP_002866530.1 primosomal protein N' -
  QOR50_RS03360 cipA 639076..640470 (-) 1395 WP_002874888.1 DUF2972 domain-containing protein -
  QOR50_RS03365 ispG 640616..641689 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=1158209 QOR50_RS03350 WP_002852324.1 636794..637231(+) (Cj0683) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=1158209 QOR50_RS03350 WP_002852324.1 636794..637231(+) (Cj0683) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AATGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment