Detailed information NTG1158157

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: QOR51_RS05925
• Genome accession: NZ_OX437057
• Coordinates: 1118459..1119418 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1113459..1124418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR51_RS05905	neuC	1114025..1115140 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
QOR51_RS09070	-	1115137..1116051 (+)	915	Protein_1147	beta-1,4-N-acetylgalactosaminyltransferase	-
QOR51_RS09075	-	1116085..1116747 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
QOR51_RS05915	-	1116742..1117592 (-)	851	Protein_1149	glycosyltransferase	-
QOR51_RS05920	waaV	1117576..1118400 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
QOR51_RS05925	waaF	1118459..1119418 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
QOR51_RS05930	gmhA	1119399..1119959 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
QOR51_RS05935	rfaE1	1119956..1121341 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
QOR51_RS05940	rfaD	1121334..1122287 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
QOR51_RS05945	gmhB	1122288..1122848 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
QOR51_RS05950	-	1122930..1123232 (+)	303	WP_002852762.1	cytochrome c	-
QOR51_RS05955	ccoS	1123255..1123461 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1158157 QOR51_RS05925 WP_002875425.1 1118459..1119418(+) (waaF) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1158157 QOR51_RS05925 WP_002875425.1 1118459..1119418(+) (waaF) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1