Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SMUFR_RS09980 Genome accession   NZ_CP007016
Coordinates   2030798..2031568 (+) Length   256 a.a.
NCBI ID   WP_002262649.1    Uniprot ID   -
Organism   Streptococcus mutans UA159-FR     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2025798..2036568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUFR_RS09965 (SMUFR_1875) - 2027422..2028084 (-) 663 WP_002262652.1 YoaK family protein -
  SMUFR_RS09970 (SMUFR_1876) rlmH 2028427..2028906 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SMUFR_RS09975 (SMUFR_1877) htrA 2029112..2030320 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  SMUFR_RS09980 (SMUFR_1878) spo0J 2030798..2031568 (+) 771 WP_002262649.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 256 a.a.        Molecular weight: 29510.18 Da        Isoelectric Point: 10.1578

>NTDB_id=115813 SMUFR_RS09980 WP_002262649.1 2030798..2031568(+) (spo0J) [Streptococcus mutans UA159-FR]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKTSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=115813 SMUFR_RS09980 WP_002262649.1 2030798..2031568(+) (spo0J) [Streptococcus mutans UA159-FR]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAAACTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

100

100

1


Multiple sequence alignment