Detailed information    

insolico Bioinformatically predicted

Overview


Name   brsM   Type   Regulator
Locus tag   SMUFR_RS09600 Genome accession   NZ_CP007016
Coordinates   1953175..1953621 (+) Length   148 a.a.
NCBI ID   WP_002262388.1    Uniprot ID   -
Organism   Streptococcus mutans UA159-FR     
Function   repress competence development; negative regulate BrsR activity (predicted from homology)   
Competence regulation

Genomic Context


Location: 1948175..1958621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUFR_RS09570 (SMUFR_1801) - 1949690..1951261 (-) 1572 WP_011074689.1 membrane protein -
  SMUFR_RS10965 - 1951298..1951426 (-) 129 WP_002262383.1 hypothetical protein -
  SMUFR_RS09580 (SMUFR_1802) - 1951495..1951794 (-) 300 WP_002262384.1 DUF1292 domain-containing protein -
  SMUFR_RS09585 (SMUFR_1803) ruvX 1951875..1952294 (-) 420 WP_002262385.1 Holliday junction resolvase RuvX -
  SMUFR_RS09590 (SMUFR_1804) - 1952291..1952560 (-) 270 WP_002262386.1 IreB family regulatory phosphoprotein -
  SMUFR_RS09595 (SMUFR_1805) brsR 1952728..1953162 (+) 435 WP_002262387.1 bacteriocin genes transcriptional regulator BrsR Regulator
  SMUFR_RS09600 (SMUFR_1806) brsM 1953175..1953621 (+) 447 WP_002262388.1 bacteriocin genes regulator BrsM Regulator
  SMUFR_RS10575 - 1953612..1953824 (-) 213 WP_002262389.1 hypothetical protein -
  SMUFR_RS09605 (SMUFR_1807) - 1953951..1954376 (-) 426 WP_002262390.1 hypothetical protein -
  SMUFR_RS09610 (SMUFR_1808) spx 1954627..1955025 (-) 399 WP_002262391.1 transcriptional regulator Spx -
  SMUFR_RS09615 (SMUFR_1809) recA 1955110..1956261 (-) 1152 WP_002262392.1 recombinase RecA Machinery gene
  SMUFR_RS09620 (SMUFR_1810) cinA 1956301..1957557 (-) 1257 WP_002262393.1 competence/damage-inducible protein A Machinery gene
  SMUFR_RS09625 (SMUFR_1811) - 1957706..1958266 (-) 561 WP_002262394.1 DNA-3-methyladenine glycosylase I -

Sequence


Protein


Download         Length: 148 a.a.        Molecular weight: 17106.61 Da        Isoelectric Point: 10.1992

>NTDB_id=115809 SMUFR_RS09600 WP_002262388.1 1953175..1953621(+) (brsM) [Streptococcus mutans UA159-FR]
MKILKQIITYSFIGIGIGSLMNYFIAIFFFPNSNPLGVPSFVQLFSSVSQATAVQLFIFALLGVLQGFASSLFKNEKLSL
LTTSLIHYLFIVLPLLLAGSYLHWFYMTRKYFVFSFLLVSIIYILIYLFCYFENKKNIQKINKKLHQI

Nucleotide


Download         Length: 447 bp        

>NTDB_id=115809 SMUFR_RS09600 WP_002262388.1 1953175..1953621(+) (brsM) [Streptococcus mutans UA159-FR]
ATGAAAATACTCAAACAGATTATTACTTACAGTTTTATTGGTATAGGAATCGGTTCTTTAATGAATTATTTCATAGCCAT
CTTCTTTTTCCCAAATAGTAATCCACTTGGTGTCCCAAGTTTTGTTCAACTTTTTTCATCAGTTTCACAGGCAACAGCAG
TCCAACTTTTCATTTTTGCTCTTCTAGGCGTTTTACAAGGATTTGCTAGCAGCCTCTTTAAAAATGAAAAACTCAGTCTA
CTAACCACAAGCTTGATTCACTATTTATTCATTGTCCTACCACTTCTCTTAGCCGGATCTTATTTACACTGGTTTTACAT
GACTCGGAAATATTTCGTTTTTTCTTTCCTTTTAGTTTCTATTATTTATATACTCATTTACTTATTCTGCTATTTTGAAA
ATAAAAAAAACATTCAAAAAATCAATAAGAAGCTGCATCAAATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsM Streptococcus mutans UA159

100

100

1


Multiple sequence alignment