Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   SMUFR_RS09420 Genome accession   NZ_CP007016
Coordinates   1913072..1913785 (+) Length   237 a.a.
NCBI ID   WP_002273717.1    Uniprot ID   Q8KST2
Organism   Streptococcus mutans UA159-FR     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1908072..1918785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUFR_RS10895 - 1908853..1909191 (-) 339 Protein_1809 lipase -
  SMUFR_RS09410 (SMUFR_1773) treC 1909277..1910905 (-) 1629 WP_002262351.1 alpha,alpha-phosphotrehalase -
  SMUFR_RS09415 (SMUFR_1774) treP 1910931..1912898 (-) 1968 WP_002262352.1 PTS system trehalose-specific EIIBC component -
  SMUFR_RS09420 (SMUFR_1775) treR 1913072..1913785 (+) 714 WP_002273717.1 trehalose operon repressor Regulator
  SMUFR_RS09425 (SMUFR_1776) dexA 1914131..1916683 (-) 2553 WP_011074684.1 dextranase DexA -
  SMUFR_RS09430 (SMUFR_1777) dtd 1917168..1917614 (-) 447 WP_002262355.1 D-aminoacyl-tRNA deacylase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27781.09 Da        Isoelectric Point: 9.7425

>NTDB_id=115807 SMUFR_RS09420 WP_002273717.1 1913072..1913785(+) (treR) [Streptococcus mutans UA159-FR]
MKKYEIIFKKLEEDILKGHYQMGDYLPPEMELSQTYASSRDTVRKALQLLTKAGFIKTVQGRGSQIIKRERINFPVSQLT
SYQELVKQLQMNVKTNVIAIDKLIVDEKLTKLTGFENKGLVWRITRQRVIDGVASILDTDYLDKALIPHMTREIAEHSIY
DYLENQLKLDIAYAQKIITIDQVSQKDKILLDLDSENHVVSVKSKVYLSNQQQFQFTESRHKLEKFRFVDFARRHRD

Nucleotide


Download         Length: 714 bp        

>NTDB_id=115807 SMUFR_RS09420 WP_002273717.1 1913072..1913785(+) (treR) [Streptococcus mutans UA159-FR]
ATGAAAAAATATGAAATTATTTTTAAAAAACTAGAAGAAGATATTCTCAAAGGACACTATCAAATGGGTGACTATCTTCC
CCCTGAAATGGAACTTAGCCAGACCTATGCCAGCAGCCGAGATACTGTTAGAAAGGCTTTACAGCTCTTGACTAAGGCAG
GTTTTATTAAAACAGTACAGGGAAGGGGATCCCAAATTATCAAGCGTGAGCGCATTAACTTTCCTGTTTCTCAACTAACC
AGCTATCAAGAATTGGTTAAACAATTGCAGATGAATGTCAAGACAAATGTTATTGCTATTGATAAACTGATTGTTGATGA
GAAACTCACCAAACTAACCGGTTTTGAAAATAAAGGTCTTGTCTGGCGCATCACAAGACAGCGCGTCATAGACGGCGTTG
CTTCCATTTTAGATACGGATTATTTGGATAAAGCATTGATTCCTCATATGACCAGAGAAATCGCTGAACATTCTATCTAT
GATTATCTTGAAAATCAACTTAAGCTGGACATTGCCTATGCTCAAAAGATTATTACCATAGATCAAGTATCGCAAAAAGA
TAAAATTTTGCTTGATTTGGATTCTGAAAATCATGTCGTTTCGGTTAAATCTAAAGTTTATCTCAGTAATCAGCAGCAAT
TTCAATTCACTGAAAGCCGGCACAAACTGGAAAAGTTCCGTTTTGTTGACTTTGCCAGACGGCATCGTGATTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-65)

UTRA domain (UTRA)

(90-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8KST2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

100

100

1

Multiple sequence alignment