Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP56_RS08100 Genome accession   NZ_OX419652
Coordinates   1544184..1544768 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis isolate NRS6131     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1539184..1549768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP56_RS08070 (NRS6131_08030) dapD 1539371..1540081 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP56_RS08075 (NRS6131_08035) dapI 1540151..1541275 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  KJP56_RS08080 (NRS6131_08040) ykuS 1541337..1541582 (+) 246 WP_003232382.1 YkuS family protein -
  KJP56_RS08085 (NRS6131_08045) mscT 1541619..1542422 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP56_RS08090 (NRS6131_08050) ahpA 1542659..1543201 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP56_RS08095 (NRS6131_08055) ykuV 1543272..1543718 (+) 447 WP_032725606.1 thiol-disulfide oxidoreductase YkuV -
  KJP56_RS08100 (NRS6131_08060) rok 1544184..1544768 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  KJP56_RS08105 (NRS6131_08065) cse15 1544809..1545774 (-) 966 WP_021479381.1 spore protein Cse15 -
  KJP56_RS08110 (NRS6131_08070) mobA 1545911..1546510 (+) 600 WP_038829588.1 molybdenum cofactor guanylyltransferase -
  KJP56_RS08115 (NRS6131_08075) moeB 1546561..1547580 (+) 1020 WP_049139875.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP56_RS08120 (NRS6131_08080) glp 1547598..1548890 (+) 1293 WP_049139877.1 gephyrin-like molybdotransferase Glp -
  KJP56_RS08125 (NRS6131_08085) mobB 1548851..1549372 (+) 522 WP_049139878.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=1158060 KJP56_RS08100 WP_014113628.1 1544184..1544768(+) (rok) [Bacillus subtilis isolate NRS6131]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=1158060 KJP56_RS08100 WP_014113628.1 1544184..1544768(+) (rok) [Bacillus subtilis isolate NRS6131]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment