Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KJP56_RS08000 Genome accession   NZ_OX419652
Coordinates   1528346..1528810 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate NRS6131     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1523346..1533810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP56_RS07980 (NRS6131_07935) kinA 1523813..1525633 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  KJP56_RS07985 (NRS6131_07940) dapX 1525643..1526824 (-) 1182 WP_021479391.1 aminotransferase A -
  KJP56_RS07990 (NRS6131_07945) - 1527026..1527187 (-) 162 WP_014476654.1 hypothetical protein -
  KJP56_RS07995 (NRS6131_07950) cheV 1527391..1528302 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  KJP56_RS08000 (NRS6131_07955) kre 1528346..1528810 (-) 465 WP_003232406.1 YkyB family protein Regulator
  KJP56_RS08005 (NRS6131_07960) ykuC 1528936..1530228 (-) 1293 WP_003245267.1 MFS transporter -
  KJP56_RS08010 (NRS6131_07965) ltdD 1530304..1530790 (-) 487 Protein_1516 L,D-transpeptidase family protein -
  KJP56_RS08015 (NRS6131_07970) ppeE 1530847..1531707 (-) 861 WP_003232400.1 metallophosphoesterase -
  KJP56_RS08020 (NRS6131_07975) fadH 1531850..1532614 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1158059 KJP56_RS08000 WP_003232406.1 1528346..1528810(-) (kre) [Bacillus subtilis isolate NRS6131]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1158059 KJP56_RS08000 WP_003232406.1 1528346..1528810(-) (kre) [Bacillus subtilis isolate NRS6131]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment