Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KJP56_RS04975 Genome accession   NZ_OX419652
Coordinates   979489..980283 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6131     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 974489..985283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP56_RS04945 (NRS6131_04965) sxzA 975328..976359 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  KJP56_RS04950 (NRS6131_04970) yfhB 976474..977355 (+) 882 WP_213419622.1 PhzF family phenazine biosynthesis isomerase -
  KJP56_RS04955 (NRS6131_04975) yfhC 977443..978027 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  KJP56_RS04960 (NRS6131_04980) yfhD 978066..978257 (-) 192 WP_213419621.1 YfhD family protein -
  KJP56_RS04965 (NRS6131_04985) yfhE 978324..978434 (-) 111 WP_003223230.1 YfhE family protein -
  KJP56_RS04970 (NRS6131_04990) yfhF 978489..979400 (-) 912 WP_038829481.1 TIGR01777 family oxidoreductase -
  KJP56_RS04975 (NRS6131_04995) recX 979489..980283 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  KJP56_RS04980 (NRS6131_05000) yfhH 980285..980599 (+) 315 WP_003244592.1 YfhH family protein -
  KJP56_RS04985 (NRS6131_05010) yfhI 980742..981935 (+) 1194 WP_003243500.1 MFS transporter -
  KJP56_RS04990 (NRS6131_05015) sspK 981967..982119 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KJP56_RS04995 (NRS6131_05020) yfhJ 982244..982513 (+) 270 WP_003243789.1 YfhJ family protein -
  KJP56_RS05000 (NRS6131_05025) yfhK 982657..983175 (+) 519 WP_049140591.1 SH3 domain-containing protein -
  KJP56_RS05005 (NRS6131_05030) spdL 983260..983577 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  KJP56_RS05010 (NRS6131_05035) ephM 983579..984439 (+) 861 WP_213419620.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=1158042 KJP56_RS04975 WP_029726844.1 979489..980283(+) (recX) [Bacillus subtilis isolate NRS6131]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1158042 KJP56_RS04975 WP_029726844.1 979489..980283(+) (recX) [Bacillus subtilis isolate NRS6131]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment