Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KJP56_RS02355 Genome accession   NZ_OX419652
Coordinates   436858..436998 (+) Length   46 a.a.
NCBI ID   WP_250622322.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6131     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 431858..441998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP56_RS02350 srfAB 433722..436814 (+) 3093 Protein_420 surfactin non-ribosomal peptide synthetase SrfAB -
  KJP56_RS02355 comS 436858..436998 (+) 141 WP_250622322.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5230.02 Da        Isoelectric Point: 9.2422

>NTDB_id=1158037 KJP56_RS02355 WP_250622322.1 436858..436998(+) (comS) [Bacillus subtilis isolate NRS6131]
MNRSGKHLISSVILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1158037 KJP56_RS02355 WP_250622322.1 436858..436998(+) (comS) [Bacillus subtilis isolate NRS6131]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCGTTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment