Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | KJP56_RS00245 | Genome accession | NZ_OX419652 |
| Coordinates | 44521..44811 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis isolate NRS6131 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39521..49811
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP56_RS00205 (NRS6131_00225) | darA | 39544..39873 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| KJP56_RS00210 (NRS6131_00230) | yaaR | 39886..40326 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| KJP56_RS00215 (NRS6131_00235) | holB | 40338..41327 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| KJP56_RS00220 (NRS6131_00240) | ricT | 41330..42157 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| KJP56_RS00225 (NRS6131_00245) | yabA | 42172..42531 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| KJP56_RS00230 (NRS6131_00250) | trmNF | 42590..43333 (+) | 744 | WP_021479732.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| KJP56_RS00235 (NRS6131_00255) | yazA | 43320..43619 (+) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| KJP56_RS00240 (NRS6131_00260) | rsmI | 43594..44472 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| KJP56_RS00245 (NRS6131_00265) | abrB | 44521..44811 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| KJP56_RS00250 (NRS6131_00270) | metG | 45305..47299 (+) | 1995 | WP_213419821.1 | methionine--tRNA ligase | - |
| KJP56_RS00255 (NRS6131_00275) | dayD | 47379..48146 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| KJP56_RS00260 (NRS6131_00280) | yabE | 48302..49615 (+) | 1314 | WP_213419822.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1158031 KJP56_RS00245 WP_003226760.1 44521..44811(-) (abrB) [Bacillus subtilis isolate NRS6131]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1158031 KJP56_RS00245 WP_003226760.1 44521..44811(-) (abrB) [Bacillus subtilis isolate NRS6131]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |