Detailed information NTG1158024

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP60_RS20850
• Genome accession: NZ_OX419580
• Coordinates: 3937886..3939031 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6116
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3932886..3944031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP60_RS20830 (NRS6116_20765)	albF	3932902..3934182 (+)	1281	WP_003242974.1	pitrilysin family protein	-
KJP60_RS20835 (NRS6116_20770)	albG	3934179..3934880 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KJP60_RS20840 (NRS6116_20775)	ywhL	3934886..3936262 (-)	1377	WP_003244415.1	YncE family protein	-
KJP60_RS20845 (NRS6116_20780)	ywhK	3936301..3937656 (-)	1356	WP_003227552.1	YncE family protein	-
KJP60_RS23135	-	3937653..3937883 (-)	231	WP_009968328.1	hypothetical protein	-
KJP60_RS20850 (NRS6116_20785)	rapF	3937886..3939031 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
KJP60_RS20855 (NRS6116_20790)	phrF	3939015..3939134 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KJP60_RS20860 (NRS6116_20795)	ywhH	3939233..3939706 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
KJP60_RS20865 (NRS6116_20800)	speB	3939738..3940610 (-)	873	WP_003227545.1	agmatinase	-
KJP60_RS20870 (NRS6116_20805)	speE	3940671..3941501 (-)	831	WP_003227543.1	spermidine synthase	-
KJP60_RS20875 (NRS6116_20810)	pbpG	3941703..3943778 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=1158024 KJP60_RS20850 WP_003227549.1 3937886..3939031(+) (rapF) [Bacillus subtilis isolate NRS6116]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1158024 KJP60_RS20850 WP_003227549.1 3937886..3939031(+) (rapF) [Bacillus subtilis isolate NRS6116]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572