Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   KJP60_RS19810 Genome accession   NZ_OX419580
Coordinates   3737236..3738393 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis isolate NRS6116     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3732236..3743393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP60_RS19780 (NRS6116_19750) yvyF 3732489..3732908 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  KJP60_RS19785 (NRS6116_19755) comFC 3732982..3733704 (-) 723 WP_003227991.1 comF operon protein ComFC Machinery gene
  KJP60_RS19790 (NRS6116_19760) comFB 3733668..3733964 (-) 297 WP_003227989.1 late competence protein ComFB -
  KJP60_RS19795 (NRS6116_19765) comFA 3734024..3735415 (-) 1392 WP_003243962.1 ATP-dependent helicase ComFA Machinery gene
  KJP60_RS19800 (NRS6116_19770) fakBA 3735521..3736366 (-) 846 WP_003244125.1 DegV family protein -
  KJP60_RS19805 (NRS6116_19775) degU 3736464..3737153 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  KJP60_RS19810 (NRS6116_19780) degS 3737236..3738393 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  KJP60_RS19815 (NRS6116_19785) yvyE 3738610..3739263 (+) 654 WP_003227979.1 YigZ family protein -
  KJP60_RS19820 (NRS6116_19790) tagV 3739263..3740438 (+) 1176 WP_003244117.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  KJP60_RS19825 (NRS6116_19795) tagO 3740511..3741587 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  KJP60_RS19830 (NRS6116_19800) tuaH 3741732..3742925 (-) 1194 WP_003243252.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1158020 KJP60_RS19810 WP_003227983.1 3737236..3738393(-) (degS) [Bacillus subtilis isolate NRS6116]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1158020 KJP60_RS19810 WP_003227983.1 3737236..3738393(-) (degS) [Bacillus subtilis isolate NRS6116]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment