Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KJP60_RS08110 Genome accession   NZ_OX419580
Coordinates   1523091..1523555 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate NRS6116     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1518091..1528555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP60_RS08090 (NRS6116_08140) kinA 1518557..1520377 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  KJP60_RS08095 (NRS6116_08145) dapX 1520388..1521569 (-) 1182 WP_003232415.1 aminotransferase A -
  KJP60_RS08100 (NRS6116_08150) - 1521771..1521932 (-) 162 WP_003245246.1 hypothetical protein -
  KJP60_RS08105 (NRS6116_08155) cheV 1522136..1523047 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  KJP60_RS08110 (NRS6116_08160) kre 1523091..1523555 (-) 465 WP_003232406.1 YkyB family protein Regulator
  KJP60_RS08115 (NRS6116_08165) ykuC 1523681..1524973 (-) 1293 WP_003245267.1 MFS transporter -
  KJP60_RS08120 (NRS6116_08170) ltdD 1525049..1525543 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  KJP60_RS08125 (NRS6116_08175) ppeE 1525600..1526460 (-) 861 WP_003232400.1 metallophosphoesterase -
  KJP60_RS08130 (NRS6116_08180) fadH 1526603..1527367 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1157978 KJP60_RS08110 WP_003232406.1 1523091..1523555(-) (kre) [Bacillus subtilis isolate NRS6116]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1157978 KJP60_RS08110 WP_003232406.1 1523091..1523555(-) (kre) [Bacillus subtilis isolate NRS6116]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment