Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | KJP43_RS13330 | Genome accession | NZ_OX419579 |
| Coordinates | 2550607..2551644 (-) | Length | 345 a.a. |
| NCBI ID | WP_029726718.1 | Uniprot ID | - |
| Organism | Bacillus subtilis isolate NRS6103 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2545607..2556644
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP43_RS13280 (NRS6103_13165) | tasA | 2545704..2546489 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| KJP43_RS13285 (NRS6103_13170) | sipW | 2546553..2547125 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| KJP43_RS13290 (NRS6103_13175) | tapA | 2547109..2547870 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP43_RS13295 (NRS6103_13180) | yqzG | 2548142..2548468 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP43_RS13300 (NRS6103_13185) | spoIIT | 2548510..2548689 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| KJP43_RS13305 (NRS6103_13190) | comGG | 2548761..2549135 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| KJP43_RS13310 | comGF | 2549136..2549519 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| KJP43_RS13315 (NRS6103_13200) | comGE | 2549545..2549892 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| KJP43_RS13320 (NRS6103_13205) | comGD | 2549876..2550307 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| KJP43_RS13325 (NRS6103_13210) | comGC | 2550297..2550593 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| KJP43_RS13330 (NRS6103_13215) | comGB | 2550607..2551644 (-) | 1038 | WP_029726718.1 | comG operon protein ComGB | Machinery gene |
| KJP43_RS13335 (NRS6103_13220) | comGA | 2551631..2552701 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| KJP43_RS13340 (NRS6103_13230) | - | 2552914..2553111 (-) | 198 | WP_029726717.1 | hypothetical protein | - |
| KJP43_RS13345 (NRS6103_13235) | corA | 2553113..2554066 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| KJP43_RS13350 (NRS6103_13240) | yqhB | 2554209..2555537 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| KJP43_RS13355 (NRS6103_13245) | rsbRD | 2555590..2556426 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39702.10 Da Isoelectric Point: 9.6257
>NTDB_id=1157911 KJP43_RS13330 WP_029726718.1 2550607..2551644(-) (comGB) [Bacillus subtilis isolate NRS6103]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1157911 KJP43_RS13330 WP_029726718.1 2550607..2551644(-) (comGB) [Bacillus subtilis isolate NRS6103]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |