Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP43_RS07680 Genome accession   NZ_OX419579
Coordinates   1462087..1462662 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6103     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1457087..1467662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP43_RS07650 (NRS6103_07560) dapD 1457273..1457983 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP43_RS07655 (NRS6103_07565) dapI 1458053..1459177 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  KJP43_RS07660 (NRS6103_07570) ykuS 1459239..1459484 (+) 246 WP_003232382.1 YkuS family protein -
  KJP43_RS07665 (NRS6103_07575) mscT 1459521..1460324 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP43_RS07670 (NRS6103_07580) ahpA 1460561..1461103 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP43_RS07675 (NRS6103_07585) ykuV 1461175..1461621 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  KJP43_RS07680 (NRS6103_07590) rok 1462087..1462662 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KJP43_RS07685 (NRS6103_07595) cse15 1462703..1463668 (-) 966 WP_029727015.1 spore protein Cse15 -
  KJP43_RS07690 (NRS6103_07600) mobA 1463805..1464404 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  KJP43_RS07695 (NRS6103_07605) moeB 1464455..1465474 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP43_RS07700 (NRS6103_07610) glp 1465492..1466784 (+) 1293 WP_153940190.1 gephyrin-like molybdotransferase Glp -
  KJP43_RS07705 (NRS6103_07615) mobB 1466745..1467266 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1157895 KJP43_RS07680 WP_003232378.1 1462087..1462662(+) (rok) [Bacillus subtilis isolate NRS6103]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1157895 KJP43_RS07680 WP_003232378.1 1462087..1462662(+) (rok) [Bacillus subtilis isolate NRS6103]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment