Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP45_RS07625 Genome accession   NZ_OX419578
Coordinates   1450659..1451234 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6128     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1445659..1456234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP45_RS07595 (NRS6128_07545) dapD 1445846..1446556 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP45_RS07600 (NRS6128_07550) dapI 1446626..1447750 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  KJP45_RS07605 (NRS6128_07555) ykuS 1447812..1448057 (+) 246 WP_003232382.1 YkuS family protein -
  KJP45_RS07610 (NRS6128_07560) mscT 1448094..1448897 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP45_RS07615 (NRS6128_07565) ahpA 1449134..1449676 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP45_RS07620 (NRS6128_07570) ykuV 1449747..1450193 (+) 447 WP_038428900.1 thiol-disulfide oxidoreductase YkuV -
  KJP45_RS07625 (NRS6128_07575) rok 1450659..1451234 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KJP45_RS07630 (NRS6128_07580) cse15 1451275..1452240 (-) 966 WP_213414451.1 spore protein Cse15 -
  KJP45_RS07635 (NRS6128_07585) mobA 1452377..1452976 (+) 600 WP_213414452.1 molybdenum cofactor guanylyltransferase -
  KJP45_RS07640 (NRS6128_07590) moeB 1453027..1454046 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP45_RS07645 (NRS6128_07595) glp 1454064..1455356 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  KJP45_RS07650 (NRS6128_07600) mobB 1455317..1455838 (+) 522 WP_043857419.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1157817 KJP45_RS07625 WP_003232378.1 1450659..1451234(+) (rok) [Bacillus subtilis isolate NRS6128]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1157817 KJP45_RS07625 WP_003232378.1 1450659..1451234(+) (rok) [Bacillus subtilis isolate NRS6128]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment