Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KJP45_RS07525 Genome accession   NZ_OX419578
Coordinates   1434780..1435244 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate NRS6128     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1429780..1440244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP45_RS07505 (NRS6128_07450) kinA 1430247..1432067 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  KJP45_RS07510 (NRS6128_07455) dapX 1432077..1433258 (-) 1182 WP_213414448.1 aminotransferase A -
  KJP45_RS07515 (NRS6128_07460) - 1433460..1433621 (-) 162 WP_003245246.1 hypothetical protein -
  KJP45_RS07520 (NRS6128_07465) cheV 1433825..1434736 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  KJP45_RS07525 (NRS6128_07470) kre 1434780..1435244 (-) 465 WP_003232406.1 YkyB family protein Regulator
  KJP45_RS07530 (NRS6128_07475) ykuC 1435370..1436662 (-) 1293 WP_213414449.1 MFS transporter -
  KJP45_RS07535 (NRS6128_07480) ltdD 1436738..1437232 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  KJP45_RS07540 (NRS6128_07485) ppeE 1437289..1438149 (-) 861 WP_003232400.1 metallophosphoesterase -
  KJP45_RS07545 (NRS6128_07490) fadH 1438292..1439056 (+) 765 WP_080529266.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1157816 KJP45_RS07525 WP_003232406.1 1434780..1435244(-) (kre) [Bacillus subtilis isolate NRS6128]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1157816 KJP45_RS07525 WP_003232406.1 1434780..1435244(-) (kre) [Bacillus subtilis isolate NRS6128]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment