Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   KJP45_RS06115 Genome accession   NZ_OX419578
Coordinates   1184249..1185400 (+) Length   383 a.a.
NCBI ID   WP_032677406.1    Uniprot ID   A0AAP1HA15
Organism   Bacillus subtilis isolate NRS6128     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1179249..1190400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP45_RS06080 (NRS6128_06025) yjbB 1179921..1181138 (+) 1218 WP_213414521.1 MFS transporter -
  KJP45_RS06085 (NRS6128_06030) yjbC 1181302..1181880 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  KJP45_RS06090 (NRS6128_06035) spx 1182061..1182456 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  KJP45_RS06095 (NRS6128_06040) yjbE 1182499..1183155 (-) 657 WP_003232944.1 TerC family protein -
  KJP45_RS06100 - 1183325..1183465 (+) 141 WP_119122854.1 hypothetical protein -
  KJP45_RS06105 (NRS6128_06045) mecA 1183432..1184088 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  KJP45_RS06110 - 1184083..1184205 (-) 123 WP_021479547.1 hypothetical protein -
  KJP45_RS06115 (NRS6128_06050) coiA 1184249..1185400 (+) 1152 WP_032677406.1 competence protein CoiA Machinery gene
  KJP45_RS06120 (NRS6128_06055) pepF 1185630..1187459 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  KJP45_RS06125 (NRS6128_06060) - 1187497..1187664 (-) 168 WP_003244944.1 hypothetical protein -
  KJP45_RS06130 (NRS6128_06075) spxH 1187978..1188877 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  KJP45_RS06135 (NRS6128_06080) yjbI 1188874..1189272 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  KJP45_RS06140 (NRS6128_06085) cwlQ 1189524..1190258 (-) 735 WP_250629115.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44801.93 Da        Isoelectric Point: 10.0034

>NTDB_id=1157812 KJP45_RS06115 WP_032677406.1 1184249..1185400(+) (coiA) [Bacillus subtilis isolate NRS6128]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1157812 KJP45_RS06115 WP_032677406.1 1184249..1185400(+) (coiA) [Bacillus subtilis isolate NRS6128]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGTGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAATTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

99.196

97.389

0.966


Multiple sequence alignment