Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KJP45_RS04470 Genome accession   NZ_OX419578
Coordinates   880031..880825 (+) Length   264 a.a.
NCBI ID   WP_213415021.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6128     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 875031..885825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP45_RS04440 (NRS6128_04415) sxzA 875870..876901 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  KJP45_RS04445 (NRS6128_04420) yfhB 877016..877897 (+) 882 WP_213415020.1 PhzF family phenazine biosynthesis isomerase -
  KJP45_RS04450 (NRS6128_04425) yfhC 877985..878569 (+) 585 WP_003243940.1 nitroreductase -
  KJP45_RS04455 (NRS6128_04430) yfhD 878608..878799 (-) 192 WP_038428644.1 YfhD family protein -
  KJP45_RS04460 (NRS6128_04435) yfhE 878866..878976 (-) 111 WP_003223230.1 YfhE family protein -
  KJP45_RS04465 (NRS6128_04440) yfhF 879031..879942 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  KJP45_RS04470 (NRS6128_04445) recX 880031..880825 (+) 795 WP_213415021.1 recombination regulator RecX Regulator
  KJP45_RS04475 (NRS6128_04450) yfhH 880827..881141 (+) 315 WP_003244592.1 YfhH family protein -
  KJP45_RS04480 (NRS6128_04455) yfhI 881284..882477 (+) 1194 WP_072692836.1 MFS transporter -
  KJP45_RS04485 (NRS6128_04460) sspK 882510..882662 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KJP45_RS04490 (NRS6128_04465) yfhJ 882787..883056 (+) 270 WP_003243789.1 YfhJ family protein -
  KJP45_RS04495 (NRS6128_04470) yfhK 883201..883719 (+) 519 WP_032677434.1 SH3 domain-containing protein -
  KJP45_RS04500 (NRS6128_04475) spdL 883804..884136 (+) 333 WP_032677433.1 SdpC immunity protein SpdL -
  KJP45_RS04505 (NRS6128_04480) ephM 884123..884983 (+) 861 WP_003233547.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31019.24 Da        Isoelectric Point: 6.9997

>NTDB_id=1157799 KJP45_RS04470 WP_213415021.1 880031..880825(+) (recX) [Bacillus subtilis isolate NRS6128]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDADTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1157799 KJP45_RS04470 WP_213415021.1 880031..880825(+) (recX) [Bacillus subtilis isolate NRS6128]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGCCGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

98.864

100

0.989

Multiple sequence alignment