Detailed information NTG1157782

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP47_RS20120
• Genome accession: NZ_OX419577
• Coordinates: 3770251..3771396 (+)
• Length: 381 a.a.
• NCBI ID: WP_213381774.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6120
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3765251..3776396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP47_RS20100 (NRS6120_20655)	albF	3765267..3766547 (+)	1281	WP_213381782.1	pitrilysin family protein	-
KJP47_RS20105 (NRS6120_20660)	albG	3766544..3767245 (+)	702	WP_213381781.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KJP47_RS20110 (NRS6120_20665)	ywhL	3767251..3768627 (-)	1377	WP_213381778.1	YncE family protein	-
KJP47_RS20115 (NRS6120_20670)	ywhK	3768666..3770021 (-)	1356	WP_213381776.1	YncE family protein	-
KJP47_RS22150	-	3770018..3770248 (-)	231	WP_043858872.1	hypothetical protein	-
KJP47_RS20120 (NRS6120_20675)	rapF	3770251..3771396 (+)	1146	WP_213381774.1	tetratricopeptide repeat protein	Regulator
KJP47_RS20125 (NRS6120_20680)	-	3771380..3771499 (+)	120	WP_014665774.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
KJP47_RS20130 (NRS6120_20685)	ywhH	3771599..3772071 (+)	473	Protein_3909	YbaK/EbsC family protein	-
KJP47_RS20135 (NRS6120_20690)	speB	3772103..3772975 (-)	873	WP_213381771.1	agmatinase	-
KJP47_RS20140 (NRS6120_20695)	speE	3773036..3773866 (-)	831	WP_003227543.1	spermidine synthase	-
KJP47_RS20145 (NRS6120_20700)	pbpG	3774069..3776144 (+)	2076	WP_213381769.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45578.27 Da
• Isoelectric Point: 5.0684

>NTDB_id=1157782 KJP47_RS20120 WP_213381774.1 3770251..3771396(+) (rapF) [Bacillus subtilis isolate NRS6120]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDLMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYVLAIQFFKKAESKLVFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYSEQTTYDIRMIQCQSLFGANFLDLKQYEKAIAHFQKAFTLAKTEQQPQLMGRTLYNIALCKQNQNSFES
AIEYVKKSIQVFEGSKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGKEYSAAAGDTVYLTEFEFLESLYLSGPDEERI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASHYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1157782 KJP47_RS20120 WP_213381774.1 3770251..3771396(+) (rapF) [Bacillus subtilis isolate NRS6120]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCTAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCCTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTTAG
AGGCATGTATGAGCTGGATCGCCGTGAATATGTATTAGCCATTCAATTCTTTAAAAAAGCTGAGAGCAAGCTGGTTTTTG
TGAAAGATAAAATCGATAAAGCTGAATTCTTTTTCAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTCTCC
ATGGACTATGCACGTCAAGCATTCGAAATATACAGTGAACAGACTACATATGATATCAGAATGATTCAATGCCAGTCCTT
ATTCGGAGCCAACTTTTTGGATTTAAAACAATACGAAAAAGCAATTGCCCATTTTCAAAAAGCCTTTACACTTGCAAAAA
CAGAGCAGCAGCCCCAATTAATGGGAAGAACACTTTATAACATAGCACTCTGCAAGCAAAACCAAAACAGTTTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCAAGTATTTGAAGGATCTAAAATGCTTCCTTCATTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCCTGTGAATATCATAAAAAAGGAAAAGAGTATTCTGCAG
CTGCGGGAGATACCGTGTATCTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCGGATGAGGAACGGATA
GAAAAATGTTTTGTTTTTCTTGAAAGTAAAATGATGTATGCAGATATTGAGGACTTCGCACTTGATGTTGCTAAATATTA
TCATCAACAGGAAAATTACAAAAAAGCATCTCATTACTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (263-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (189-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	79.79	100	0.798
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57